Variant report

Variant	rs8026097
Chromosome Location	chr15:49318028-49318029
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr15:49316228..49318590-chr15:49318966..49321819,3	K562	blood:

Extended variants
information (count: 22 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs11070677	0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs11070679	0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11635777	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12441272	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12442006	0.94[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12904439	0.84[AFR][1000 genomes];0.92[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12915955	0.85[ASN][1000 genomes]
rs12916364	0.82[AFR][1000 genomes];0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2305195	0.96[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs34825252	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs35212550	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4354871	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4480739	0.86[ASN][1000 genomes]
rs4775791	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs4775793	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs4775797	0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs7177541	0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs725815	0.85[ASN][1000 genomes]
rs935001	0.85[ASN][1000 genomes]
rs935002	0.85[ASN][1000 genomes]
rs935004	0.85[ASN][1000 genomes]
rs9920868	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]

No data

Chromatin state (count:123 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:49282800-49333400	Weak transcription	A549	lung
2	chr15:49283600-49337600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
3	chr15:49285000-49329000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
4	chr15:49289200-49336400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
5	chr15:49298000-49328400	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
6	chr15:49298000-49328800	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
7	chr15:49298200-49329800	Strong transcription	Primary T helper cells fromperipheralblood	blood
8	chr15:49298400-49322000	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
9	chr15:49298400-49322000	Strong transcription	Primary B cells from peripheral blood	blood
10	chr15:49298600-49325200	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
11	chr15:49298600-49329600	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr15:49301400-49329000	Weak transcription	K562	blood
13	chr15:49303000-49327600	Weak transcription	Right Ventricle	heart
14	chr15:49304200-49318800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
15	chr15:49308400-49318200	Weak transcription	Fetal Brain Female	brain
16	chr15:49308400-49320000	Weak transcription	HepG2	liver
17	chr15:49308400-49320200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
18	chr15:49308400-49327000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
19	chr15:49308400-49327600	Weak transcription	Dnd41	blood
20	chr15:49308600-49319000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
21	chr15:49308600-49320000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
22	chr15:49308600-49320600	Weak transcription	Fetal Heart	heart
23	chr15:49308600-49323000	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
24	chr15:49308600-49326800	Weak transcription	Esophagus	oesophagus
25	chr15:49308600-49327000	Weak transcription	Gastric	stomach
26	chr15:49308800-49320000	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
27	chr15:49308800-49326800	Weak transcription	Fetal Thymus	thymus
28	chr15:49308800-49328200	Weak transcription	Small Intestine	intestine
29	chr15:49308800-49331800	Weak transcription	H9 Cell Line	embryonic stem cell
30	chr15:49308800-49334400	Weak transcription	Psoas Muscle	Psoas
31	chr15:49309200-49327600	Weak transcription	NHEK	skin
32	chr15:49309400-49318200	Weak transcription	Fetal Brain Male	brain
33	chr15:49309400-49320000	Weak transcription	Colonic Mucosa	Colon
34	chr15:49309600-49319000	Weak transcription	H1 Cell Line	embryonic stem cell
35	chr15:49309600-49320200	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
36	chr15:49309600-49321600	Weak transcription	HMEC	breast
37	chr15:49309800-49319000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
38	chr15:49309800-49319800	Weak transcription	HUVEC	blood vessel
39	chr15:49310000-49319000	Weak transcription	NHLF	lung
40	chr15:49310000-49320200	Weak transcription	Hela-S3	cervix
41	chr15:49310000-49328400	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
42	chr15:49310600-49323600	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
43	chr15:49310600-49324400	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
44	chr15:49311200-49324600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
45	chr15:49311400-49318200	Weak transcription	HUES48 Cell Line	embryonic stem cell
46	chr15:49312000-49323200	Strong transcription	Monocytes-CD14+_RO01746	blood
47	chr15:49312400-49318200	Weak transcription	Brain Substantia Nigra	brain
48	chr15:49313000-49320000	Weak transcription	Lung	lung
49	chr15:49313200-49321000	Strong transcription	HUES64 Cell Line	embryonic stem cell
50	chr15:49313400-49318600	Weak transcription	Rectal Smooth Muscle	rectum

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