Variant report

Variant	rs8077595
Chromosome Location	chr17:63317711-63317712
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr17:63315988..63318004-chr17:63321536..63323086,2	MCF-7	breast:
2	chr17:63316027..63318596-chr17:63327880..63330457,2	MCF-7	breast:
3	chr17:63316336..63318466-chr17:63325602..63328379,2	K562	blood:
4	chr1:121484703..121485269-chr17:63316773..63317753,2	MCF-7	breast:

Extended variants
information (count: 49 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:48)

rs_ID	r²[population]
rs10514868	1.00[ASN][1000 genomes]
rs12325710	1.00[ASN][1000 genomes]
rs12450635	1.00[ASN][1000 genomes]
rs12450829	1.00[ASN][1000 genomes]
rs12451981	1.00[ASN][1000 genomes]
rs12452228	1.00[ASN][1000 genomes]
rs12452865	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12453218	1.00[ASN][1000 genomes]
rs1399292	1.00[ASN][1000 genomes]
rs1399293	1.00[ASN][1000 genomes]
rs16960740	1.00[ASN][1000 genomes]
rs16960881	1.00[ASN][1000 genomes]
rs16960933	1.00[ASN][1000 genomes]
rs16960958	1.00[ASN][1000 genomes]
rs16961081	1.00[ASN][1000 genomes]
rs16961956	1.00[ASN][1000 genomes]
rs17689830	1.00[ASN][1000 genomes]
rs17689972	1.00[ASN][1000 genomes]
rs17690009	1.00[ASN][1000 genomes]
rs17690085	1.00[ASN][1000 genomes]
rs17746268	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17746729	1.00[ASN][1000 genomes]
rs17746759	1.00[ASN][1000 genomes]
rs17746801	1.00[ASN][1000 genomes]
rs17763241	1.00[ASN][1000 genomes]
rs17763899	1.00[ASN][1000 genomes]
rs41390346	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55809615	1.00[ASN][1000 genomes]
rs56058698	1.00[ASN][1000 genomes]
rs56288597	1.00[ASN][1000 genomes]
rs56363901	1.00[ASN][1000 genomes]
rs56823394	1.00[ASN][1000 genomes]
rs60618269	1.00[ASN][1000 genomes]
rs61339087	1.00[ASN][1000 genomes]
rs61424330	1.00[ASN][1000 genomes]
rs6504293	0.98[EUR][1000 genomes]
rs7215849	1.00[ASN][1000 genomes]
rs7219811	1.00[ASN][1000 genomes]
rs7220359	1.00[ASN][1000 genomes]
rs7220496	1.00[ASN][1000 genomes]
rs7224836	1.00[ASN][1000 genomes]
rs73330418	1.00[ASN][1000 genomes]
rs73994741	1.00[ASN][1000 genomes]
rs73994779	1.00[ASN][1000 genomes]
rs8077158	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9889638	1.00[ASN][1000 genomes]
rs9915344	1.00[ASN][1000 genomes]
rs9915678	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv482610	chr17:63214370-63372334	Enhancers Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:63316400-63321600	Weak transcription	Gastric	stomach

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links