Variant report

Variant	rs824144
Chromosome Location	chr10:25592817-25592818
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 44 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:43)

rs_ID	r²[population]
rs10741075	0.91[ASN][1000 genomes]
rs10764539	0.86[JPT][hapmap]
rs10828770	0.92[ASN][1000 genomes]
rs11014490	0.92[ASN][1000 genomes]
rs1245966	0.92[ASN][1000 genomes]
rs1245967	0.92[ASN][1000 genomes]
rs1341966	0.82[ASN][1000 genomes]
rs1754260	0.80[JPT][hapmap]
rs1760716	0.82[ASN][1000 genomes]
rs1760755	0.82[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1760758	0.82[ASN][1000 genomes]
rs1760759	0.82[ASN][1000 genomes]
rs1773648	0.85[ASN][1000 genomes]
rs1773649	0.87[ASN][1000 genomes]
rs1773650	0.87[ASN][1000 genomes]
rs1773651	0.88[ASN][1000 genomes]
rs1812401	0.93[CHB][hapmap];0.94[JPT][hapmap]
rs2262989	0.86[ASN][1000 genomes]
rs2807245	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2807247	0.83[AFR][1000 genomes];0.82[ASN][1000 genomes]
rs2807248	0.86[JPT][hapmap];0.93[ASN][1000 genomes]
rs2807250	0.85[CEU][hapmap];0.86[CHB][hapmap]
rs2807253	0.92[ASN][1000 genomes]
rs4423091	0.94[ASN][1000 genomes]
rs476972	0.86[ASN][1000 genomes]
rs489052	0.81[CHB][hapmap];0.87[ASN][1000 genomes]
rs489186	0.88[CHB][hapmap];0.87[ASN][1000 genomes]
rs495338	0.87[ASN][1000 genomes]
rs495456	0.81[CHB][hapmap];0.87[ASN][1000 genomes]
rs516071	0.87[ASN][1000 genomes]
rs518751	0.83[ASN][1000 genomes]
rs532538	0.98[ASN][1000 genomes]
rs541206	0.81[CHB][hapmap];0.87[ASN][1000 genomes]
rs545616	0.83[CHB][hapmap];0.83[JPT][hapmap]
rs558947	0.85[CEU][hapmap];0.86[CHB][hapmap];0.86[JPT][hapmap]
rs573812	0.81[CHB][hapmap];0.87[ASN][1000 genomes]
rs578033	0.92[ASN][1000 genomes]
rs7100128	0.99[ASN][1000 genomes]
rs7922827	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs824145	0.81[CHB][hapmap];0.87[JPT][hapmap];1.00[ASN][1000 genomes]
rs824146	0.86[JPT][hapmap];1.00[ASN][1000 genomes]
rs824147	0.86[CHB][hapmap]
rs862192	0.87[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2761583	chr10:25525657-25722444	Weak transcription Enhancers ZNF genes & repeats Active TSS Strong transcription Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
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