Variant report

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs10035207	0.93[CEU][hapmap];0.85[EUR][1000 genomes]
rs10038556	0.93[CEU][hapmap];0.87[EUR][1000 genomes]
rs10043569	0.86[EUR][1000 genomes]
rs10055821	1.00[CEU][hapmap];0.91[EUR][1000 genomes]
rs10058249	0.93[CEU][hapmap];0.81[EUR][1000 genomes]
rs11242655	0.86[JPT][hapmap]
rs11242656	0.86[JPT][hapmap]
rs11744308	1.00[JPT][hapmap]
rs12514858	0.90[JPT][hapmap]
rs13157529	0.93[CEU][hapmap];0.84[EUR][1000 genomes]
rs17160784	0.95[JPT][hapmap]
rs17165766	0.95[JPT][hapmap]
rs28526654	0.82[EUR][1000 genomes]
rs28576367	0.88[EUR][1000 genomes]
rs28640040	0.91[EUR][1000 genomes]
rs34288950	0.88[EUR][1000 genomes]
rs34768879	0.83[EUR][1000 genomes]
rs34846952	0.87[EUR][1000 genomes]
rs35478096	0.85[EUR][1000 genomes]
rs35575289	0.81[EUR][1000 genomes]
rs4144479	0.91[JPT][hapmap]
rs4957734	0.93[CEU][hapmap];0.83[EUR][1000 genomes]
rs57099988	0.83[EUR][1000 genomes]
rs6858950	0.85[CEU][hapmap]
rs6864189	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6882485	0.90[EUR][1000 genomes]
rs723398	0.85[CEU][hapmap]
rs885624	0.95[JPT][hapmap]
rs9885456	0.83[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv882682	chr5:107213361-107458336	Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:107319800-107354000	Weak transcription	Primary B cells from cord blood	blood
2	chr5:107327400-107353400	Weak transcription	Aorta	Aorta
3	chr5:107339200-107352400	Weak transcription	Adipose Nuclei	Adipose
4	chr5:107339200-107357400	Weak transcription	Primary T helper cells fromperipheralblood	blood
5	chr5:107339200-107361200	Weak transcription	Fetal Heart	heart
6	chr5:107339200-107364200	Weak transcription	Left Ventricle	heart
7	chr5:107339600-107350800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
8	chr5:107339600-107364200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
9	chr5:107339600-107373800	Weak transcription	Primary T cells from cord blood	blood
10	chr5:107341000-107342600	Enhancers	Fetal Brain Male	brain
11	chr5:107341400-107342800	Enhancers	Fetal Brain Female	brain

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