The 2.0 version of rSNPBase

Variant report

Variant rs9530917
Chromosome Location chr13:79991854-79991855
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:79980800-80007200 Weak transcription Spleen Spleen
2 chr13:79981000-79997400 Weak transcription Lung lung
3 chr13:79981000-79997600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr13:79981000-79998000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
5 chr13:79981000-79998000 Weak transcription Ovary ovary
6 chr13:79981000-80007200 Weak transcription Aorta Aorta
7 chr13:79981200-79995800 Weak transcription HSMMtube muscle
8 chr13:79981200-79997600 Weak transcription Fetal Muscle Leg muscle
9 chr13:79981200-80010200 Weak transcription Right Ventricle heart
10 chr13:79981400-79997800 Weak transcription H1 Cell Line embryonic stem cell
11 chr13:79981400-80000200 Weak transcription Psoas Muscle Psoas
12 chr13:79981600-79992000 Weak transcription Primary T regulatory cells fromperipheralblood blood
13 chr13:79981600-79992200 Weak transcription HSMM muscle
14 chr13:79981600-79993600 Weak transcription ES-I3 Cell Line embryonic stem cell
15 chr13:79981600-79993600 Weak transcription HUES48 Cell Line embryonic stem cell
16 chr13:79981600-79993600 Weak transcription Adipose Nuclei Adipose
17 chr13:79981600-79993600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
18 chr13:79981600-79993800 Weak transcription Primary hematopoietic stem cells blood
19 chr13:79981600-79996800 Weak transcription Duodenum Smooth Muscle Duodenum
20 chr13:79981600-79997600 Weak transcription Muscle Satellite Cultured Cells --
21 chr13:79981600-79997600 Weak transcription Skeletal Muscle Male skeletal muscle
22 chr13:79981600-79998000 Weak transcription Primary hematopoietic stem cells short term culture blood
23 chr13:79981600-79998200 Weak transcription Brain Cingulate Gyrus brain
24 chr13:79981600-79998200 Weak transcription Brain Hippocampus Middle brain
25 chr13:79981800-79993600 Weak transcription Primary B cells from cord blood blood
26 chr13:79981800-80001600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
27 chr13:79982000-79992800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
28 chr13:79982000-79997200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
29 chr13:79982200-79997600 Weak transcription NHEK skin
30 chr13:79982200-79998000 Weak transcription Brain Anterior Caudate brain
31 chr13:79982400-79997600 Weak transcription Fetal Lung lung
32 chr13:79982600-79992000 Weak transcription HMEC breast
33 chr13:79982600-80006400 Weak transcription Gastric stomach
34 chr13:79982800-79997600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr13:79982800-79998400 Weak transcription Sigmoid Colon Sigmoid Colon
36 chr13:79982800-79998600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr13:79983000-79998600 Weak transcription Dnd41 blood
38 chr13:79983600-80003400 Weak transcription GM12878-XiMat blood
39 chr13:79984200-79997600 Weak transcription Liver Liver
40 chr13:79985800-79994200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr13:79987800-79997000 Weak transcription Fetal Stomach stomach
42 chr13:79987800-80001400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
43 chr13:79988000-79998200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr13:79988400-79998000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
45 chr13:79988600-79997800 Weak transcription Primary T cells fromperipheralblood blood
46 chr13:79989400-79998200 Weak transcription Primary T cells from cord blood blood
47 chr13:79989400-79998200 Weak transcription Left Ventricle heart
48 chr13:79989600-79998200 Weak transcription Fetal Adrenal Gland Adrenal Gland
49 chr13:79989800-79995800 Weak transcription Primary B cells from peripheral blood blood
50 chr13:79990000-79995600 Weak transcription Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015