Variant report

Variant	rs1748761
Chromosome Location	chr13:79981626-79981627
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr13:79979031-79981704	HepG2	liver:	n/a	n/a
2	POLR2A	chr13:79976521-79982167	GM12891	blood:	n/a	n/a
3	CEBPB	chr13:79981483-79981877	K562	blood:	n/a	n/a
4	WRNIP1	chr13:79981490-79981629	GM12878	blood:	n/a	n/a
5	CEBPB	chr13:79981492-79981820	Hela-S3	cervix:	n/a	n/a
6	POLR2A	chr13:79979425-79981742	PBDE	blood:	n/a	n/a
7	POLR2A	chr13:79979168-79982244	MCF10A-Er-Src	breast:	n/a	n/a
8	POLR2A	chr13:79978483-79982627	MCF10A-Er-Src	breast:	n/a	n/a
9	CEBPB	chr13:79981552-79981712	K562	blood:	n/a	n/a
10	CEBPB	chr13:79981490-79981830	K562	blood:	n/a	n/a
11	POLR2A	chr13:79979216-79981687	Raji	blood:	n/a	n/a
12	POLR2A	chr13:79980131-79984465	K562	blood:	n/a	n/a
13	POLR2A	chr13:79981548-79981635	HUVEC	blood vessel:	n/a	n/a
14	POLR2A	chr13:79981581-79981943	GM12878	blood:	n/a	n/a
15	POLR2A	chr13:79979691-79982079	K562	blood:	n/a	n/a
16	TBL1XR1	chr13:79981569-79981626	K562	blood:	n/a	n/a
17	IRF1	chr13:79981208-79981891	K562	blood:	n/a	chr13:79981779-79981792
18	POLR2A	chr13:79979427-79981688	U87	brain:	n/a	n/a
19	POLR2A	chr13:79979188-79982271	Hela-S3	cervix:	n/a	n/a
20	POLR2A	chr13:79979158-79982018	GM12878	blood:	n/a	n/a
21	ARID3A	chr13:79980232-79981650	K562	blood:	n/a	chr13:79980376-79980391
22	MAFK	chr13:79981519-79981750	Hela-S3	cervix:	n/a	n/a
23	POLR2A	chr13:79981222-79981724	SK-N-MC	brain:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr13:79980450..79981962-chr13:80054323..80056011,2	K562	blood:
2	chr13:79980707..79982787-chr13:79986192..79988065,2	MCF-7	breast:
3	chr13:79979196..79982246-chr13:80054691..80057070,3	MCF-7	breast:

Variant related genes	Relation type
RBM26	TF binding region
ENSG00000102471	Chromatin interaction
ENSG00000232132	Chromatin interaction

Extended variants
information (count: 184 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:182)

rs_ID	r²[population]
rs1022891	0.82[JPT][hapmap]
rs11620233	0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1212082	0.88[JPT][hapmap]
rs12865187	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap]
rs12871015	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap]
rs12877507	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1324868	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1335368	0.88[JPT][hapmap]
rs1335370	0.88[JPT][hapmap]
rs1408049	0.88[JPT][hapmap]
rs1408658	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.97[YRI][hapmap]
rs1409018	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.96[YRI][hapmap]
rs1410336	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.97[YRI][hapmap]
rs1475797	0.80[CHB][hapmap];0.88[JPT][hapmap]
rs1577416	0.80[CHB][hapmap];0.88[JPT][hapmap]
rs1577418	0.88[JPT][hapmap]
rs1590465	0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1616547	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1619669	0.93[AFR][1000 genomes];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1624537	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1748762	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1748763	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1748768	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.96[YRI][hapmap]
rs1748769	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1749982	0.91[AFR][1000 genomes];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1752648	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.97[YRI][hapmap]
rs1752649	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.96[YRI][hapmap]
rs1853830	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1886494	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1980764	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2025913	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.97[YRI][hapmap]
rs2031815	0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2057573	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.96[YRI][hapmap]
rs2095477	0.95[ASN][1000 genomes]
rs2147568	0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2182009	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2182010	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap]
rs2182873	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.97[YRI][hapmap]
rs2265377	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.80[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2265378	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.80[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2265381	0.86[AFR][1000 genomes];0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2265382	0.89[AFR][1000 genomes];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2274555	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap]
rs2296287	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2477395	0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2477397	0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2484345	0.98[ASN][1000 genomes]
rs2760102	0.80[CHB][hapmap];0.88[JPT][hapmap]
rs2760105	0.80[CHB][hapmap];0.88[JPT][hapmap]
rs2760106	0.88[JPT][hapmap]
rs2763809	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2763810	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2765078	0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2783119	0.80[CHB][hapmap];0.88[JPT][hapmap]
rs2783121	0.88[JPT][hapmap]
rs2783122	0.88[JPT][hapmap]
rs2876740	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs314689	0.89[ASN][1000 genomes]
rs314690	0.91[ASN][1000 genomes]
rs314692	0.98[ASN][1000 genomes]
rs314693	0.98[ASN][1000 genomes]
rs314694	0.98[ASN][1000 genomes]
rs314695	0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3187338	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.96[YRI][hapmap]
rs35476664	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3742117	1.00[CEU][hapmap];0.93[CHB][hapmap];0.94[JPT][hapmap];0.93[YRI][hapmap]
rs3742118	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.93[YRI][hapmap]
rs3742119	1.00[CHB][hapmap];0.94[JPT][hapmap]
rs3742120	0.83[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs3742122	0.82[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.83[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs3752994	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.97[YRI][hapmap]
rs3764150	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs3818563	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.96[YRI][hapmap]
rs3903388	1.00[CHB][hapmap];0.94[JPT][hapmap]
rs4146473	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.96[YRI][hapmap];0.93[AFR][1000 genomes];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs416660	0.98[ASN][1000 genomes]
rs418150	0.98[ASN][1000 genomes]
rs4605023	0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4885634	0.80[JPT][hapmap]
rs4885636	0.88[JPT][hapmap]
rs57821487	0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs586219	0.98[ASN][1000 genomes]
rs643778	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.83[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6563098	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.96[YRI][hapmap]
rs6563100	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.96[YRI][hapmap];0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6563104	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.97[YRI][hapmap];0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6563113	0.80[CHB][hapmap];0.88[JPT][hapmap]
rs7317343	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.93[YRI][hapmap]
rs7317416	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.97[YRI][hapmap]
rs7319252	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap]
rs7319320	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.97[YRI][hapmap]
rs7321186	0.93[AFR][1000 genomes];0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7322167	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.97[YRI][hapmap]
rs7322673	0.96[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.97[YRI][hapmap]
rs7322901	0.93[AFR][1000 genomes];0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7323246	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7327386	0.83[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap]
rs7327603	1.00[CEU][hapmap];0.87[CHB][hapmap];0.94[JPT][hapmap];0.97[YRI][hapmap]
rs7328494	0.88[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.94[AFR][1000 genomes];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7329331	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.96[YRI][hapmap];0.91[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7330479	0.93[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7331525	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7331766	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7331867	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7331872	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7332367	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap]
rs7332913	1.00[CEU][hapmap];0.94[CHB][hapmap];0.94[JPT][hapmap];0.96[YRI][hapmap]
rs7336186	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7336581	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7336939	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7336979	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7338530	0.80[CHB][hapmap];0.85[JPT][hapmap]
rs7338678	0.95[ASN][1000 genomes]
rs7339303	0.80[CHB][hapmap];0.88[JPT][hapmap]
rs7981067	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.96[YRI][hapmap]
rs7981500	0.93[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7986306	0.81[AFR][1000 genomes];0.99[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7987193	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7987769	0.83[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap]
rs7988784	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap]
rs7990321	0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7990344	0.86[JPT][hapmap]
rs7996652	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.97[YRI][hapmap]
rs7998837	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap]
rs8001281	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs8001308	0.91[ASN][1000 genomes]
rs8001392	0.90[AFR][1000 genomes];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs8001622	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs8001795	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs8002042	0.80[CHB][hapmap];0.88[JPT][hapmap]
rs8002838	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs912639	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9318621	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.97[YRI][hapmap]
rs9318623	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap]
rs9318625	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.97[YRI][hapmap]
rs9318626	1.00[CHB][hapmap];0.94[JPT][hapmap]
rs9318627	1.00[CHB][hapmap];0.94[JPT][hapmap]
rs9318634	0.96[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap]
rs9318638	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9318640	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9318641	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9530895	0.97[YRI][hapmap]
rs9530899	1.00[CEU][hapmap];1.00[CHB][hapmap];0.93[JPT][hapmap];0.96[YRI][hapmap]
rs9530901	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.96[YRI][hapmap]
rs9530913	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.96[YRI][hapmap];0.93[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9530914	1.00[CHB][hapmap];0.94[JPT][hapmap];0.94[ASN][1000 genomes]
rs9530915	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9530917	0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9530920	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9545065	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.97[YRI][hapmap]
rs9545066	1.00[CEU][hapmap];1.00[CHB][hapmap];0.92[JPT][hapmap];0.96[YRI][hapmap]
rs9545067	0.82[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap]
rs9545076	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.96[YRI][hapmap]
rs9545083	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.96[YRI][hapmap]
rs9545085	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.96[YRI][hapmap]
rs9545086	1.00[CHB][hapmap];0.94[JPT][hapmap]
rs9545087	1.00[CHB][hapmap];0.94[JPT][hapmap]
rs9545097	1.00[CHB][hapmap];0.94[JPT][hapmap];0.94[ASN][1000 genomes]
rs9545101	1.00[CHB][hapmap];0.94[JPT][hapmap];0.94[ASN][1000 genomes]
rs9545104	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9545106	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9545108	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9545109	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9545113	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9545114	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9565486	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap]
rs9565489	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.96[YRI][hapmap]
rs9565496	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9565497	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9565500	0.96[ASN][1000 genomes]
rs9565510	0.88[JPT][hapmap]
rs9574409	0.82[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap]
rs9574416	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9574418	0.94[ASN][1000 genomes]
rs9574419	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9574420	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9574422	1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs9574434	0.88[JPT][hapmap]
rs9593396	1.00[CHB][hapmap];0.94[JPT][hapmap];0.94[ASN][1000 genomes]
rs9601226	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9601227	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs987284	0.88[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832657	chr13:79904978-80099108	Active TSS Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	34 gene(s)	inside rSNPs	diseases
2	nsv523979	chr13:79979679-80120263	Strong transcription Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs1748761	RBM26	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:93 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:79978800-79981800	Active TSS	K562	blood
2	chr13:79980800-79982000	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
3	chr13:79980800-80007200	Weak transcription	Spleen	Spleen
4	chr13:79981000-79981800	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
5	chr13:79981000-79981800	Enhancers	Primary T killer memory cells from peripheral blood	blood
6	chr13:79981000-79983400	Weak transcription	Small Intestine	intestine
7	chr13:79981000-79987000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
8	chr13:79981000-79987400	Weak transcription	Left Ventricle	heart
9	chr13:79981000-79987600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr13:79981000-79989600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
11	chr13:79981000-79991200	Weak transcription	Pancreas	Pancrea
12	chr13:79981000-79997400	Weak transcription	Lung	lung
13	chr13:79981000-79997600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
14	chr13:79981000-79998000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
15	chr13:79981000-79998000	Weak transcription	Ovary	ovary
16	chr13:79981000-80007200	Weak transcription	Aorta	Aorta
17	chr13:79981200-79981800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
18	chr13:79981200-79981800	Enhancers	Primary B cells from cord blood	blood
19	chr13:79981200-79981800	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
20	chr13:79981200-79982000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
21	chr13:79981200-79982000	Flanking Active TSS	Dnd41	blood
22	chr13:79981200-79982200	Enhancers	Primary T helper naive cells fromperipheralblood	blood
23	chr13:79981200-79982400	Enhancers	Fetal Lung	lung
24	chr13:79981200-79982400	Enhancers	Stomach Mucosa	stomach
25	chr13:79981200-79982600	Enhancers	Gastric	stomach
26	chr13:79981200-79987600	Weak transcription	Fetal Muscle Trunk	muscle
27	chr13:79981200-79991000	Weak transcription	Placenta	Placenta
28	chr13:79981200-79995800	Weak transcription	HSMMtube	muscle
29	chr13:79981200-79997600	Weak transcription	Fetal Muscle Leg	muscle
30	chr13:79981200-80010200	Weak transcription	Right Ventricle	heart
31	chr13:79981400-79981800	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
32	chr13:79981400-79981800	Enhancers	Brain Inferior Temporal Lobe	brain
33	chr13:79981400-79981800	Flanking Active TSS	HepG2	liver
34	chr13:79981400-79982000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
35	chr13:79981400-79982000	Enhancers	Liver	Liver
36	chr13:79981400-79982000	Enhancers	Fetal Thymus	thymus
37	chr13:79981400-79982000	Enhancers	Rectal Mucosa Donor 31	rectum
38	chr13:79981400-79982000	Enhancers	Hela-S3	cervix
39	chr13:79981400-79982200	Enhancers	Primary T killer naive cells fromperipheralblood	blood
40	chr13:79981400-79982200	Enhancers	Fetal Heart	heart
41	chr13:79981400-79982200	Enhancers	Fetal Intestine Large	intestine
42	chr13:79981400-79982600	Enhancers	Cortex derived primary cultured neurospheres	brain
43	chr13:79981400-79982600	Flanking Active TSS	GM12878-XiMat	blood
44	chr13:79981400-79983000	Enhancers	Breast Myoepithelial Primary Cells	Breast
45	chr13:79981400-79987000	Weak transcription	Fetal Stomach	stomach
46	chr13:79981400-79989400	Weak transcription	Brain Substantia Nigra	brain
47	chr13:79981400-79997800	Weak transcription	H1 Cell Line	embryonic stem cell
48	chr13:79981400-80000200	Weak transcription	Psoas Muscle	Psoas
49	chr13:79981600-79981800	Enhancers	HUES64 Cell Line	embryonic stem cell
50	chr13:79981600-79981800	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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