Variant report

Variant rs2182009
Chromosome Location chr13:79971916-79971917
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:79951200-79979200 Weak transcription Esophagus oesophagus
2 chr13:79951800-79978200 Weak transcription Aorta Aorta
3 chr13:79952600-79977800 Weak transcription Placenta Amnion Placenta Amnion
4 chr13:79958800-79977800 Weak transcription H9 Cell Line embryonic stem cell
5 chr13:79960600-79975600 Weak transcription Ovary ovary
6 chr13:79962800-79973000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
7 chr13:79962800-79974400 Weak transcription iPS-15b Cell Line embryonic stem cell
8 chr13:79967600-79972000 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
9 chr13:79968000-79972800 Weak transcription NHEK skin
10 chr13:79968000-79973000 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr13:79968000-79975200 Weak transcription Skeletal Muscle Female skeletal muscle
12 chr13:79968000-79975800 Weak transcription HMEC breast
13 chr13:79968000-79976600 Weak transcription Right Ventricle heart
14 chr13:79968000-79977800 Weak transcription Gastric stomach
15 chr13:79968200-79972800 Weak transcription Brain Cingulate Gyrus brain
16 chr13:79968200-79973400 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
17 chr13:79968200-79974400 Weak transcription Brain Angular Gyrus brain
18 chr13:79968200-79974600 Weak transcription Brain Inferior Temporal Lobe brain
19 chr13:79968200-79975600 Weak transcription Skeletal Muscle Male skeletal muscle
20 chr13:79968400-79972800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
21 chr13:79968400-79975800 Weak transcription Rectal Mucosa Donor 29 rectum
22 chr13:79968400-79977200 Weak transcription Right Atrium heart
23 chr13:79968400-79979200 Weak transcription Lung lung
24 chr13:79968600-79973000 Weak transcription Adipose Nuclei Adipose
25 chr13:79968600-79973000 Weak transcription Liver Liver
26 chr13:79968600-79973000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
27 chr13:79968600-79975600 Weak transcription Rectal Smooth Muscle rectum
28 chr13:79968600-79976600 Weak transcription Colon Smooth Muscle Colon
29 chr13:79968600-79977800 Weak transcription Spleen Spleen
30 chr13:79968600-79978600 Weak transcription Placenta Placenta
31 chr13:79968600-79978600 Weak transcription Pancreas Pancrea
32 chr13:79968600-79979200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
33 chr13:79968800-79974600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr13:79969000-79972000 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr13:79969000-79972400 ZNF genes & repeats GM12878-XiMat blood
36 chr13:79969000-79973200 Weak transcription Small Intestine intestine
37 chr13:79969000-79976000 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr13:79969200-79972600 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
39 chr13:79969200-79973200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
40 chr13:79969200-79975400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
41 chr13:79969200-79975600 Weak transcription Psoas Muscle Psoas
42 chr13:79969200-79975600 Weak transcription Sigmoid Colon Sigmoid Colon
43 chr13:79969200-79975800 Strong transcription Fetal Thymus thymus
44 chr13:79969200-79977800 Weak transcription Left Ventricle heart
45 chr13:79969400-79972400 Weak transcription Fetal Brain Male brain
46 chr13:79969400-79972800 Weak transcription Primary T killer memory cells from peripheral blood blood
47 chr13:79969400-79974400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
48 chr13:79969600-79972200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
49 chr13:79969600-79972200 Weak transcription Primary T helper naive cells fromperipheralblood blood
50 chr13:79969600-79972200 Weak transcription Primary T killer naive cells fromperipheralblood blood

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