The 2.0 version of rSNPBase

Variant report

Variant rs9545109
Chromosome Location chr13:79987615-79987616
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:79980800-80007200 Weak transcription Spleen Spleen
2 chr13:79981000-79989600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
3 chr13:79981000-79991200 Weak transcription Pancreas Pancrea
4 chr13:79981000-79997400 Weak transcription Lung lung
5 chr13:79981000-79997600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr13:79981000-79998000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
7 chr13:79981000-79998000 Weak transcription Ovary ovary
8 chr13:79981000-80007200 Weak transcription Aorta Aorta
9 chr13:79981200-79991000 Weak transcription Placenta Placenta
10 chr13:79981200-79995800 Weak transcription HSMMtube muscle
11 chr13:79981200-79997600 Weak transcription Fetal Muscle Leg muscle
12 chr13:79981200-80010200 Weak transcription Right Ventricle heart
13 chr13:79981400-79989400 Weak transcription Brain Substantia Nigra brain
14 chr13:79981400-79997800 Weak transcription H1 Cell Line embryonic stem cell
15 chr13:79981400-80000200 Weak transcription Psoas Muscle Psoas
16 chr13:79981600-79987800 Weak transcription Primary T cells from cord blood blood
17 chr13:79981600-79987800 Weak transcription NHDF-Ad bronchial
18 chr13:79981600-79988400 Weak transcription Thymus Thymus
19 chr13:79981600-79989400 Weak transcription Fetal Brain Male brain
20 chr13:79981600-79989600 Weak transcription Fetal Brain Female brain
21 chr13:79981600-79990400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
22 chr13:79981600-79990800 Weak transcription Skeletal Muscle Female skeletal muscle
23 chr13:79981600-79992000 Weak transcription Primary T regulatory cells fromperipheralblood blood
24 chr13:79981600-79992200 Weak transcription HSMM muscle
25 chr13:79981600-79993600 Weak transcription ES-I3 Cell Line embryonic stem cell
26 chr13:79981600-79993600 Weak transcription HUES48 Cell Line embryonic stem cell
27 chr13:79981600-79993600 Weak transcription Adipose Nuclei Adipose
28 chr13:79981600-79993600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
29 chr13:79981600-79993800 Weak transcription Primary hematopoietic stem cells blood
30 chr13:79981600-79996800 Weak transcription Duodenum Smooth Muscle Duodenum
31 chr13:79981600-79997600 Weak transcription Muscle Satellite Cultured Cells --
32 chr13:79981600-79997600 Weak transcription Skeletal Muscle Male skeletal muscle
33 chr13:79981600-79998000 Weak transcription Primary hematopoietic stem cells short term culture blood
34 chr13:79981600-79998200 Weak transcription Brain Cingulate Gyrus brain
35 chr13:79981600-79998200 Weak transcription Brain Hippocampus Middle brain
36 chr13:79981800-79987800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr13:79981800-79993600 Weak transcription Primary B cells from cord blood blood
38 chr13:79981800-80001600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
39 chr13:79982000-79989200 Weak transcription Fetal Adrenal Gland Adrenal Gland
40 chr13:79982000-79991000 Weak transcription Brain Germinal Matrix brain
41 chr13:79982000-79992800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
42 chr13:79982000-79997200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
43 chr13:79982200-79990600 Weak transcription Primary T killer naive cells fromperipheralblood blood
44 chr13:79982200-79990800 Weak transcription Primary T helper naive cells fromperipheralblood blood
45 chr13:79982200-79991200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr13:79982200-79997600 Weak transcription NHEK skin
47 chr13:79982200-79998000 Weak transcription Brain Anterior Caudate brain
48 chr13:79982400-79997600 Weak transcription Fetal Lung lung
49 chr13:79982600-79988200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
50 chr13:79982600-79989200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015