Variant report

Variant	rs12877507
Chromosome Location	chr13:79975957-79975958
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CTCF	chr13:79975900-79976050	GM06990	blood:	n/a	n/a
2	ZNF384	chr13:79975661-79976765	GM12878	blood:	n/a	n/a
3	ZNF143	chr13:79975698-79976107	GM12878	blood:	n/a	n/a
4	NFATC1	chr13:79975412-79976272	GM12878	blood:	n/a	n/a
5	EP300	chr13:79975575-79976165	GM12878	blood:	n/a	n/a
6	POLR2A	chr13:79975917-79976083	GM12891	blood:	n/a	n/a
7	CHD1	chr13:79975796-79976229	GM12878	blood:	n/a	n/a
8	SPI1	chr13:79975801-79976159	GM12891	blood:	n/a	n/a
9	BHLHE40	chr13:79975870-79976158	GM12878	blood:	n/a	n/a
10	CTCF	chr13:79975900-79976050	BE2_C	brain:	n/a	n/a
11	MXI1	chr13:79975812-79976287	GM12878	blood:	n/a	chr13:79976093-79976102
12	POLR2A	chr13:79975461-79976111	GM12878	blood:	n/a	n/a
13	CTCF	chr13:79975853-79976188	GM12878	blood:	n/a	n/a
14	CTCF	chr13:79975840-79975990	GM12866	blood:	n/a	n/a
15	KAP1	chr13:79975486-79976005	U2OS	brain:	n/a	n/a
16	CTCF	chr13:79975900-79976050	GM12865	blood:	n/a	n/a
17	CTCF	chr13:79975920-79976070	GM12873	blood:	n/a	n/a
18	POLR2A	chr13:79975673-79976153	GM12892	blood:	n/a	n/a
19	STAT3	chr13:79975818-79976096	GM12878	blood:	n/a	n/a
20	TBP	chr13:79975705-79976152	GM12878	blood:	n/a	n/a
21	CTCF	chr13:79975900-79976050	HepG2	liver:	n/a	n/a
22	SPI1	chr13:79975820-79976119	GM12878	blood:	n/a	n/a
23	CTCF	chr13:79975920-79976070	GM12865	blood:	n/a	n/a
24	CTCF	chr13:79975880-79976030	GM12864	blood:	n/a	n/a
25	CTCF	chr13:79975903-79976224	K562	blood:	n/a	n/a
26	TBL1XR1	chr13:79975601-79976008	GM12878	blood:	n/a	n/a
27	SPI1	chr13:79975784-79976118	HL-60	blood:	n/a	n/a
28	CTCF	chr13:79975900-79976050	GM12873	blood:	n/a	n/a
29	WRNIP1	chr13:79975844-79976103	GM12878	blood:	n/a	n/a
30	SPI1	chr13:79975836-79976117	GM12891	blood:	n/a	n/a
31	POLR2A	chr13:79975577-79976123	GM12878	blood:	n/a	n/a
32	JUND	chr13:79975905-79977096	K562	blood:	n/a	chr13:79976974-79976984 chr13:79976974-79976983 chr13:79976974-79976984 chr13:79976976-79976983
33	CTCF	chr13:79975920-79976070	GM12878	blood:	n/a	n/a
34	BCLAF1	chr13:79975700-79976271	GM12878	blood:	n/a	n/a
35	CTCF	chr13:79975920-79976070	GM12874	blood:	n/a	n/a
36	CTCF	chr13:79975920-79976070	SK-N-SH_RA	brain:	n/a	n/a
37	CTCF	chr13:79975900-79976050	GM12872	blood:	n/a	n/a
38	KAP1	chr13:79975362-79976043	HEK293	kidney:	n/a	n/a
39	CTCF	chr13:79975954-79976067	GM12878	blood:	n/a	n/a
40	RUNX3	chr13:79975801-79976205	GM12878	blood:	n/a	n/a
41	RFX5	chr13:79975900-79976084	GM12878	blood:	n/a	n/a
42	CTCF	chr13:79975920-79976070	GM06990	blood:	n/a	n/a
43	STAT3	chr13:79975934-79976133	MCF10A-Er-Src	breast:	n/a	n/a
44	RCOR1	chr13:79975601-79976103	GM12878	blood:	n/a	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr13:79964555..79966375-chr13:79975893..79978787,3	MCF-7	breast:
2	chr13:79966275..79969690-chr13:79971723..79976630,6	K562	blood:

Variant related genes	Relation type
RBM26-AS1	TF binding region

Extended variants
information (count: 182 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:181)

rs_ID	r²[population]
rs1022891	0.88[JPT][hapmap];0.80[ASN][1000 genomes]
rs11620233	0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1212082	0.80[CHB][hapmap];0.82[JPT][hapmap]
rs12865187	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12871015	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1324868	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1335368	0.82[JPT][hapmap]
rs1335370	0.82[JPT][hapmap]
rs1408049	0.82[JPT][hapmap]
rs1408658	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1409018	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1410336	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1475797	0.81[CHB][hapmap];0.82[JPT][hapmap]
rs1577416	0.81[CHB][hapmap];0.82[JPT][hapmap]
rs1577418	0.82[JPT][hapmap]
rs1590465	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1616547	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1619669	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1624537	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1627031	0.88[AFR][1000 genomes]
rs1748761	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1748762	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1748763	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1748768	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1748769	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1749982	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1752648	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1752649	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1853830	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.96[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1886494	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1980764	0.86[AFR][1000 genomes];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2025913	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2031815	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2057573	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2095477	0.91[ASN][1000 genomes]
rs2147568	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2182009	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2182010	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap]
rs2182873	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2265377	0.82[CEU][hapmap];1.00[CHB][hapmap];0.93[JPT][hapmap];0.95[ASN][1000 genomes]
rs2265378	0.82[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.95[ASN][1000 genomes]
rs2265381	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2265382	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2274554	0.88[YRI][hapmap]
rs2274555	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs2296287	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2477395	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2477397	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2484345	0.95[ASN][1000 genomes]
rs2760102	0.81[CHB][hapmap];0.82[JPT][hapmap]
rs2760105	0.81[CHB][hapmap];0.82[JPT][hapmap]
rs2760106	0.82[JPT][hapmap]
rs2763809	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2763810	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2765078	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2783119	0.81[CHB][hapmap];0.82[JPT][hapmap]
rs2783121	0.82[JPT][hapmap]
rs2783122	0.82[JPT][hapmap]
rs2876740	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs314689	0.87[ASN][1000 genomes]
rs314690	0.87[ASN][1000 genomes]
rs314692	0.95[ASN][1000 genomes]
rs314693	0.95[ASN][1000 genomes]
rs314694	0.95[ASN][1000 genomes]
rs314695	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3187338	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs35476664	0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3742117	1.00[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap]
rs3742118	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs3742119	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs3742120	0.83[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3742122	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3752994	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs3764150	0.91[AFR][1000 genomes];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs3818563	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs3903388	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs4146473	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs416660	0.95[ASN][1000 genomes]
rs418150	0.95[ASN][1000 genomes]
rs4605023	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4885636	0.82[JPT][hapmap]
rs57821487	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs586219	0.95[ASN][1000 genomes]
rs643778	0.82[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.80[AMR][1000 genomes];0.83[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6563098	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs6563100	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6563104	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6563113	0.81[CHB][hapmap];0.82[JPT][hapmap]
rs7317343	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7317416	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7319252	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs7319320	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7321186	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7322167	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7322673	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7322901	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7323246	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7327386	0.83[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7327603	1.00[CEU][hapmap];0.87[CHB][hapmap];1.00[JPT][hapmap]
rs7328494	0.88[CEU][hapmap];1.00[CHB][hapmap];0.93[JPT][hapmap];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7329331	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7330479	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7331525	0.93[AFR][1000 genomes];0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7331766	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7331867	0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7331872	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7332367	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap]
rs7332913	1.00[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap]
rs7336186	0.91[AFR][1000 genomes];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7336581	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.86[AFR][1000 genomes];0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7336939	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7336979	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7338530	0.81[CHB][hapmap]
rs7338678	0.87[AFR][1000 genomes];0.94[ASN][1000 genomes]
rs7339303	0.81[CHB][hapmap];0.81[JPT][hapmap]
rs7981067	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7981500	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7986306	0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7987193	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.96[YRI][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7987769	0.83[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7988784	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap]
rs7990321	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7996652	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7998837	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap]
rs8001281	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs8001308	0.87[ASN][1000 genomes]
rs8001392	0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs8001622	0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs8001795	0.80[AMR][1000 genomes];0.83[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs8002042	0.81[CHB][hapmap];0.82[JPT][hapmap]
rs8002838	0.80[AMR][1000 genomes];0.83[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs912639	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9318621	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9318623	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap]
rs9318625	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9318626	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9318627	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9318634	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[YRI][hapmap]
rs9318638	0.90[AMR][1000 genomes];0.88[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9318640	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.96[YRI][hapmap];0.91[AFR][1000 genomes];0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9318641	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.86[AFR][1000 genomes];0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9530899	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9530901	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9530913	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9530914	1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs9530915	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9530917	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9530920	0.80[AMR][1000 genomes];0.83[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9545065	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9545066	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9545067	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9545076	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9545083	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9545085	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9545086	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9545087	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9545097	1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs9545101	1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs9545104	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9545106	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9545108	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9545109	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9545113	0.80[AMR][1000 genomes];0.83[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9545114	0.80[AMR][1000 genomes];0.83[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9565486	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap]
rs9565489	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9565496	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9565497	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9565500	0.93[ASN][1000 genomes]
rs9565510	0.81[JPT][hapmap]
rs9574409	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9574416	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9574418	0.98[ASN][1000 genomes]
rs9574419	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9574420	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9574422	1.00[CHB][hapmap];0.94[JPT][hapmap];0.95[ASN][1000 genomes]
rs9574434	0.82[JPT][hapmap]
rs9593396	1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs9601226	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9601227	0.90[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs987284	0.82[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832657	chr13:79904978-80099108	Active TSS Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	34 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs12877507	RBM26	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:125 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:79951200-79979200	Weak transcription	Esophagus	oesophagus
2	chr13:79951800-79978200	Weak transcription	Aorta	Aorta
3	chr13:79952600-79977800	Weak transcription	Placenta Amnion	Placenta Amnion
4	chr13:79958800-79977800	Weak transcription	H9 Cell Line	embryonic stem cell
5	chr13:79968000-79976600	Weak transcription	Right Ventricle	heart
6	chr13:79968000-79977800	Weak transcription	Gastric	stomach
7	chr13:79968400-79977200	Weak transcription	Right Atrium	heart
8	chr13:79968400-79979200	Weak transcription	Lung	lung
9	chr13:79968600-79976600	Weak transcription	Colon Smooth Muscle	Colon
10	chr13:79968600-79977800	Weak transcription	Spleen	Spleen
11	chr13:79968600-79978600	Weak transcription	Placenta	Placenta
12	chr13:79968600-79978600	Weak transcription	Pancreas	Pancrea
13	chr13:79968600-79979200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
14	chr13:79969000-79976000	ZNF genes & repeats	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
15	chr13:79969200-79977800	Weak transcription	Left Ventricle	heart
16	chr13:79969600-79977200	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
17	chr13:79970200-79976600	Weak transcription	Stomach Smooth Muscle	stomach
18	chr13:79970400-79977200	Weak transcription	Primary neutrophils fromperipheralblood	blood
19	chr13:79970400-79977800	Weak transcription	HSMMtube	muscle
20	chr13:79971000-79976800	Weak transcription	NH-A	brain
21	chr13:79971400-79979200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
22	chr13:79971600-79976600	Weak transcription	Fetal Lung	lung
23	chr13:79971600-79977400	Weak transcription	Fetal Kidney	kidney
24	chr13:79971600-79978800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
25	chr13:79971800-79976200	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
26	chr13:79971800-79976400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
27	chr13:79971800-79976600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
28	chr13:79971800-79976600	Weak transcription	NHLF	lung
29	chr13:79971800-79976800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
30	chr13:79971800-79977400	Weak transcription	H1 Cell Line	embryonic stem cell
31	chr13:79971800-79977400	Weak transcription	Fetal Stomach	stomach
32	chr13:79971800-79977800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
33	chr13:79971800-79977800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
34	chr13:79971800-79977800	Weak transcription	Fetal Muscle Leg	muscle
35	chr13:79971800-79978600	Weak transcription	Fetal Muscle Trunk	muscle
36	chr13:79972200-79977000	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
37	chr13:79972200-79977800	Enhancers	Primary T killer naive cells fromperipheralblood	blood
38	chr13:79972400-79976000	Genic enhancers	K562	blood
39	chr13:79972600-79976000	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
40	chr13:79972600-79976000	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
41	chr13:79973000-79978000	Enhancers	Fetal Brain Male	brain
42	chr13:79973400-79976600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
43	chr13:79973400-79976800	Weak transcription	Brain Cingulate Gyrus	brain
44	chr13:79973400-79977400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
45	chr13:79974000-79976200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
46	chr13:79974000-79976400	Weak transcription	Osteobl	bone
47	chr13:79974400-79976000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
48	chr13:79974400-79976400	Weak transcription	Fetal Heart	heart
49	chr13:79974400-79977600	Enhancers	iPS-15b Cell Line	embryonic stem cell
50	chr13:79974400-79978600	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood

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