The 2.0 version of rSNPBase

Variant report

Variant rs960222
Chromosome Location chr2:171846195-171846196
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:102 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:171830600-171902800 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr2:171830800-171891400 Weak transcription Spleen Spleen
3 chr2:171831000-171847600 Weak transcription Primary hematopoietic stem cells short term culture blood
4 chr2:171831000-171850000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
5 chr2:171831200-171847000 Weak transcription A549 lung
6 chr2:171831200-171857400 Weak transcription HSMMtube muscle
7 chr2:171831400-171849400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr2:171831400-171857000 Weak transcription NHEK skin
9 chr2:171831400-171879200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
10 chr2:171831400-171916200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
11 chr2:171832600-171852200 Weak transcription Fetal Intestine Small intestine
12 chr2:171833000-171848800 Weak transcription HepG2 liver
13 chr2:171837600-171849200 Weak transcription H1 Cell Line embryonic stem cell
14 chr2:171838400-171849600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
15 chr2:171838600-171862000 Weak transcription Ovary ovary
16 chr2:171838800-171847600 Weak transcription Duodenum Mucosa Duodenum
17 chr2:171838800-171861800 Weak transcription Colon Smooth Muscle Colon
18 chr2:171839000-171852400 Weak transcription NHLF lung
19 chr2:171839200-171846600 Weak transcription Liver Liver
20 chr2:171839200-171847200 Weak transcription K562 blood
21 chr2:171839200-171854800 Weak transcription Pancreas Pancrea
22 chr2:171840800-171861800 Weak transcription Small Intestine intestine
23 chr2:171840800-171879200 Weak transcription Brain Hippocampus Middle brain
24 chr2:171841000-171847200 Weak transcription HUES64 Cell Line embryonic stem cell
25 chr2:171841000-171848800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
26 chr2:171841000-171852400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
27 chr2:171841000-171862400 Weak transcription iPS-15b Cell Line embryonic stem cell
28 chr2:171841000-171865400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
29 chr2:171841000-171877800 Weak transcription ES-I3 Cell Line embryonic stem cell
30 chr2:171841000-171895800 Weak transcription H9 Cell Line embryonic stem cell
31 chr2:171841400-171849800 Weak transcription Brain Substantia Nigra brain
32 chr2:171841600-171847600 Weak transcription Primary T helper cells PMA-I stimulated --
33 chr2:171841600-171859000 Weak transcription Skeletal Muscle Male skeletal muscle
34 chr2:171841600-171940000 Weak transcription Right Ventricle heart
35 chr2:171842200-171847600 Weak transcription Primary T regulatory cells fromperipheralblood blood
36 chr2:171842200-171848200 Weak transcription Muscle Satellite Cultured Cells --
37 chr2:171842200-171849000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr2:171842200-171849400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
39 chr2:171842200-171892000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr2:171842400-171847200 Weak transcription Adipose Nuclei Adipose
41 chr2:171842400-171847400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
42 chr2:171842400-171857600 Weak transcription Fetal Brain Female brain
43 chr2:171842600-171912000 Weak transcription Placenta Amnion Placenta Amnion
44 chr2:171842800-171852400 Weak transcription Aorta Aorta
45 chr2:171843000-171849200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
46 chr2:171843000-171877400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
47 chr2:171843200-171847400 Weak transcription Primary monocytes fromperipheralblood blood
48 chr2:171843200-171847800 Weak transcription Primary T helper cells fromperipheralblood blood
49 chr2:171843200-171848400 Weak transcription Skeletal Muscle Female skeletal muscle
50 chr2:171843200-171850200 Weak transcription Left Ventricle heart

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Last update: Aug 31, 2015