The 2.0 version of rSNPBase

Variant report

Variant rs10186343
Chromosome Location chr2:171933709-171933710
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:108 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:171841600-171940000 Weak transcription Right Ventricle heart
2 chr2:171878000-171943200 Weak transcription Small Intestine intestine
3 chr2:171878800-171940000 Weak transcription Stomach Mucosa stomach
4 chr2:171892400-171943400 Weak transcription Spleen Spleen
5 chr2:171898200-171946200 Weak transcription Pancreas Pancrea
6 chr2:171900000-171940000 Weak transcription Skeletal Muscle Male skeletal muscle
7 chr2:171900200-171936400 Weak transcription Primary T killer memory cells from peripheral blood blood
8 chr2:171900200-171937800 Weak transcription Primary T killer naive cells fromperipheralblood blood
9 chr2:171900400-171975400 Weak transcription Aorta Aorta
10 chr2:171903000-171940000 Weak transcription Skeletal Muscle Female skeletal muscle
11 chr2:171905800-171939200 Weak transcription HSMMtube muscle
12 chr2:171907800-171942800 Weak transcription Colon Smooth Muscle Colon
13 chr2:171911600-171943200 Weak transcription NH-A brain
14 chr2:171912400-171937400 Weak transcription Primary neutrophils fromperipheralblood blood
15 chr2:171916600-171940000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
16 chr2:171916600-171944600 Weak transcription Lung lung
17 chr2:171916600-171950200 Weak transcription H9 Cell Line embryonic stem cell
18 chr2:171916600-171970800 Weak transcription Ovary ovary
19 chr2:171916800-171935200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
20 chr2:171916800-171942200 Weak transcription Duodenum Smooth Muscle Duodenum
21 chr2:171916800-171943200 Weak transcription Muscle Satellite Cultured Cells --
22 chr2:171917000-171934600 Weak transcription Primary T helper naive cells fromperipheralblood blood
23 chr2:171917000-171937200 Weak transcription Sigmoid Colon Sigmoid Colon
24 chr2:171917000-171940400 Weak transcription ES-I3 Cell Line embryonic stem cell
25 chr2:171917000-171942600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
26 chr2:171917000-171942800 Weak transcription Adipose Nuclei Adipose
27 chr2:171917000-171942800 Weak transcription Fetal Adrenal Gland Adrenal Gland
28 chr2:171917000-171942800 Weak transcription Gastric stomach
29 chr2:171917000-171942800 Weak transcription Left Ventricle heart
30 chr2:171917000-171943000 Weak transcription Osteobl bone
31 chr2:171917000-171943200 Weak transcription Fetal Lung lung
32 chr2:171917000-171946200 Weak transcription Psoas Muscle Psoas
33 chr2:171917000-171948000 Weak transcription Fetal Muscle Leg muscle
34 chr2:171917000-171953200 Weak transcription HSMM muscle
35 chr2:171917000-171956600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
36 chr2:171917000-172000800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
37 chr2:171917200-171937600 Weak transcription HUVEC blood vessel
38 chr2:171917400-171943200 Weak transcription NHDF-Ad bronchial
39 chr2:171917600-171935200 Weak transcription Rectal Mucosa Donor 31 rectum
40 chr2:171917600-171942000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr2:171917800-171938200 Weak transcription iPS-18 Cell Line embryonic stem cell
42 chr2:171918200-171934000 Weak transcription iPS-20b Cell Line embryonic stem cell
43 chr2:171918400-171940600 Weak transcription H1 Cell Line embryonic stem cell
44 chr2:171921000-171937200 Weak transcription Primary T helper naive cells from peripheral blood blood
45 chr2:171921200-171938400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
46 chr2:171921400-171937800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
47 chr2:171921800-171935200 Weak transcription Primary T helper cells PMA-I stimulated --
48 chr2:171924000-171940400 Weak transcription Fetal Brain Male brain
49 chr2:171924800-171939800 Weak transcription Fetal Muscle Trunk muscle
50 chr2:171925800-171939000 Strong transcription GM12878-XiMat blood

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Last update: Aug 31, 2015