The 2.0 version of rSNPBase

Variant report

Variant rs6719647
Chromosome Location chr2:171895909-171895910
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:171830600-171902800 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr2:171831400-171916200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr2:171841600-171940000 Weak transcription Right Ventricle heart
4 chr2:171842600-171912000 Weak transcription Placenta Amnion Placenta Amnion
5 chr2:171846000-171898000 Weak transcription Psoas Muscle Psoas
6 chr2:171846200-171901000 Weak transcription Fetal Brain Male brain
7 chr2:171847400-171902600 Weak transcription Brain Angular Gyrus brain
8 chr2:171853200-171898800 Weak transcription Aorta Aorta
9 chr2:171859600-171897000 Weak transcription Esophagus oesophagus
10 chr2:171862600-171918400 Weak transcription Brain Germinal Matrix brain
11 chr2:171862800-171899000 Weak transcription Brain Cingulate Gyrus brain
12 chr2:171862800-171931200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
13 chr2:171863200-171896200 Weak transcription Hela-S3 cervix
14 chr2:171865800-171905000 Weak transcription Fetal Heart heart
15 chr2:171867800-171898600 Weak transcription Rectal Smooth Muscle rectum
16 chr2:171867800-171898800 Weak transcription Colonic Mucosa Colon
17 chr2:171867800-171916200 Weak transcription Gastric stomach
18 chr2:171871200-171897800 Weak transcription Pancreas Pancrea
19 chr2:171871400-171898000 Weak transcription Lung lung
20 chr2:171874800-171916200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr2:171878000-171943200 Weak transcription Small Intestine intestine
22 chr2:171878800-171940000 Weak transcription Stomach Mucosa stomach
23 chr2:171881800-171899000 Strong transcription Dnd41 blood
24 chr2:171882400-171900800 Weak transcription NH-A brain
25 chr2:171882600-171902200 Strong transcription HUES64 Cell Line embryonic stem cell
26 chr2:171883200-171897200 Strong transcription Primary T regulatory cells fromperipheralblood blood
27 chr2:171883600-171916200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
28 chr2:171884200-171913000 Strong transcription Liver Liver
29 chr2:171885600-171902800 Weak transcription iPS-15b Cell Line embryonic stem cell
30 chr2:171886000-171902200 Strong transcription iPS-20b Cell Line embryonic stem cell
31 chr2:171887400-171903200 Strong transcription Primary hematopoietic stem cells blood
32 chr2:171888200-171913800 Strong transcription HepG2 liver
33 chr2:171889000-171897800 Weak transcription Primary T killer memory cells from peripheral blood blood
34 chr2:171890400-171901400 Strong transcription HUES48 Cell Line embryonic stem cell
35 chr2:171890400-171912800 Strong transcription Placenta Placenta
36 chr2:171890400-171917600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
37 chr2:171890600-171902200 Strong transcription iPS-18 Cell Line embryonic stem cell
38 chr2:171891000-171896400 Strong transcription Primary T cells fromperipheralblood blood
39 chr2:171891000-171913400 Strong transcription Cortex derived primary cultured neurospheres brain
40 chr2:171891400-171911600 Strong transcription Rectal Mucosa Donor 29 rectum
41 chr2:171892000-171904000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
42 chr2:171892000-171906600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr2:171892400-171896000 Weak transcription Fetal Lung lung
44 chr2:171892400-171899000 Weak transcription Fetal Kidney kidney
45 chr2:171892400-171911800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr2:171892400-171943400 Weak transcription Spleen Spleen
47 chr2:171892600-171896600 Weak transcription Brain Anterior Caudate brain
48 chr2:171892600-171898000 Weak transcription Primary T killer naive cells fromperipheralblood blood
49 chr2:171892600-171899000 Strong transcription Primary B cells from peripheral blood blood
50 chr2:171892600-171899000 Weak transcription HUVEC blood vessel

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Last update: Aug 31, 2015