The 2.0 version of rSNPBase

Variant report

Variant rs6761889
Chromosome Location chr2:171945020-171945021
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:81 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:171898200-171946200 Weak transcription Pancreas Pancrea
2 chr2:171900400-171975400 Weak transcription Aorta Aorta
3 chr2:171916600-171950200 Weak transcription H9 Cell Line embryonic stem cell
4 chr2:171916600-171970800 Weak transcription Ovary ovary
5 chr2:171917000-171946200 Weak transcription Psoas Muscle Psoas
6 chr2:171917000-171948000 Weak transcription Fetal Muscle Leg muscle
7 chr2:171917000-171953200 Weak transcription HSMM muscle
8 chr2:171917000-171956600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
9 chr2:171917000-172000800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
10 chr2:171929600-171956600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
11 chr2:171931200-171950200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr2:171933200-171954000 Weak transcription Fetal Stomach stomach
13 chr2:171933200-171954200 Weak transcription Esophagus oesophagus
14 chr2:171933200-171981000 Weak transcription Rectal Smooth Muscle rectum
15 chr2:171933800-171953200 Weak transcription Breast Myoepithelial Primary Cells Breast
16 chr2:171934000-171955800 Weak transcription Duodenum Mucosa Duodenum
17 chr2:171934800-171945800 Weak transcription HMEC breast
18 chr2:171937400-171951200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
19 chr2:171937600-171947400 Weak transcription Fetal Intestine Large intestine
20 chr2:171937600-171948000 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr2:171937600-171953600 Weak transcription Fetal Intestine Small intestine
22 chr2:171937600-171956800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr2:171937800-171945800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
24 chr2:171938400-171945600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
25 chr2:171938400-171953400 Weak transcription Primary hematopoietic stem cells short term culture blood
26 chr2:171938400-171953600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr2:171938600-171946800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr2:171939000-171945200 Weak transcription Primary B cells from cord blood blood
29 chr2:171939200-171947600 Weak transcription Dnd41 blood
30 chr2:171939200-171948600 Weak transcription Monocytes-CD14+_RO01746 blood
31 chr2:171939200-171950400 Weak transcription Primary monocytes fromperipheralblood blood
32 chr2:171940200-171947400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr2:171941000-171954200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr2:171941200-171948800 Weak transcription Stomach Smooth Muscle stomach
35 chr2:171941200-171954400 Weak transcription NHEK skin
36 chr2:171941800-171950200 Weak transcription H1 Cell Line embryonic stem cell
37 chr2:171942200-171946200 Enhancers HepG2 liver
38 chr2:171942800-171947200 Enhancers Liver Liver
39 chr2:171943200-171947400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
40 chr2:171943400-171946000 Weak transcription Right Atrium heart
41 chr2:171943400-171948800 Weak transcription Colon Smooth Muscle Colon
42 chr2:171943400-171949800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
43 chr2:171943400-171959600 Weak transcription Left Ventricle heart
44 chr2:171943400-171973800 Weak transcription NH-A brain
45 chr2:171943600-171945200 Enhancers Primary T helper naive cells from peripheral blood blood
46 chr2:171943600-171945600 Enhancers Primary T helper naive cells fromperipheralblood blood
47 chr2:171943600-171945600 Enhancers Primary T helper cells fromperipheralblood blood
48 chr2:171943600-171947600 Weak transcription Primary B cells from peripheral blood blood
49 chr2:171943600-171948000 Weak transcription Brain Inferior Temporal Lobe brain
50 chr2:171943600-171948600 Weak transcription Fetal Lung lung

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Last update: Aug 31, 2015