Variant report

Variant rs1529391
Chromosome Location chr2:171826178-171826179
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:171787600-171829800 Weak transcription Right Atrium heart
2 chr2:171797000-171830600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr2:171805800-171826200 Strong transcription Fetal Thymus thymus
4 chr2:171806000-171826200 Strong transcription Fetal Intestine Large intestine
5 chr2:171806000-171826200 Strong transcription Thymus Thymus
6 chr2:171806000-171826800 Strong transcription Fetal Muscle Leg muscle
7 chr2:171809200-171826200 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr2:171811400-171830200 Weak transcription ES-WA7 Cell Line embryonic stem cell
9 chr2:171814600-171829400 Weak transcription Pancreatic Islets Pancreatic Islet
10 chr2:171818400-171829000 Weak transcription Fetal Brain Male brain
11 chr2:171819600-171829200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
12 chr2:171820200-171827000 Strong transcription Placenta Amnion Placenta Amnion
13 chr2:171822200-171829600 Weak transcription Fetal Heart heart
14 chr2:171822400-171826200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
15 chr2:171822600-171829800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
16 chr2:171822600-171830200 Weak transcription Stomach Mucosa stomach
17 chr2:171823000-171829800 Weak transcription Right Ventricle heart
18 chr2:171823200-171829000 Weak transcription Brain Cingulate Gyrus brain
19 chr2:171823200-171830200 Weak transcription Small Intestine intestine
20 chr2:171823600-171826200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr2:171823600-171829000 Weak transcription ES-I3 Cell Line embryonic stem cell
22 chr2:171823600-171829200 Weak transcription iPS-15b Cell Line embryonic stem cell
23 chr2:171823600-171829400 Weak transcription Primary T killer naive cells fromperipheralblood blood
24 chr2:171823800-171826400 Weak transcription Spleen Spleen
25 chr2:171823800-171827000 Enhancers Liver Liver
26 chr2:171823800-171827600 Strong transcription NHEK skin
27 chr2:171823800-171829000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
28 chr2:171823800-171829000 Weak transcription Brain Angular Gyrus brain
29 chr2:171823800-171829000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
30 chr2:171823800-171829000 Weak transcription Fetal Brain Female brain
31 chr2:171823800-171829000 Weak transcription Rectal Smooth Muscle rectum
32 chr2:171823800-171829200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
33 chr2:171823800-171829200 Weak transcription Primary T helper naive cells from peripheral blood blood
34 chr2:171823800-171829200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
35 chr2:171823800-171829800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
36 chr2:171823800-171829800 Weak transcription Ovary ovary
37 chr2:171823800-171829800 Weak transcription Psoas Muscle Psoas
38 chr2:171823800-171829800 Weak transcription NHDF-Ad bronchial
39 chr2:171824000-171828800 Weak transcription Colon Smooth Muscle Colon
40 chr2:171824000-171829000 Weak transcription Brain Substantia Nigra brain
41 chr2:171824000-171829000 Weak transcription Duodenum Smooth Muscle Duodenum
42 chr2:171824000-171829000 Weak transcription K562 blood
43 chr2:171824000-171829200 Weak transcription Primary B cells from peripheral blood blood
44 chr2:171824000-171829400 Weak transcription HMEC breast
45 chr2:171824000-171829600 Weak transcription Colonic Mucosa Colon
46 chr2:171824000-171829600 Weak transcription Hela-S3 cervix
47 chr2:171824000-171829600 Weak transcription HSMMtube muscle
48 chr2:171824000-171829800 Weak transcription Fetal Kidney kidney
49 chr2:171824000-171829800 Weak transcription Fetal Lung lung
50 chr2:171824400-171829400 Weak transcription Primary T helper 17 cells PMA-I stimulated --

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