Variant report
| Variant | rs6709077 |
|---|---|
| Chromosome Location | chr2:171858508-171858509 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr2:171830600-171902800 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 2 | chr2:171830800-171891400 | Weak transcription | Spleen | Spleen |
| 3 | chr2:171831400-171879200 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 4 | chr2:171831400-171916200 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 5 | chr2:171838600-171862000 | Weak transcription | Ovary | ovary |
| 6 | chr2:171838800-171861800 | Weak transcription | Colon Smooth Muscle | Colon |
| 7 | chr2:171840800-171861800 | Weak transcription | Small Intestine | intestine |
| 8 | chr2:171840800-171879200 | Weak transcription | Brain Hippocampus Middle | brain |
| 9 | chr2:171841000-171862400 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 10 | chr2:171841000-171865400 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 11 | chr2:171841000-171877800 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 12 | chr2:171841000-171895800 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 13 | chr2:171841600-171859000 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 14 | chr2:171841600-171940000 | Weak transcription | Right Ventricle | heart |
| 15 | chr2:171842200-171892000 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 16 | chr2:171842600-171912000 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 17 | chr2:171843000-171877400 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 18 | chr2:171843200-171863200 | Strong transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 19 | chr2:171843200-171871800 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 20 | chr2:171843800-171863400 | Strong transcription | Fetal Thymus | thymus |
| 21 | chr2:171844600-171868800 | Strong transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 22 | chr2:171844800-171863400 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 23 | chr2:171844800-171873000 | Strong transcription | GM12878-XiMat | blood |
| 24 | chr2:171845200-171861000 | Weak transcription | Hela-S3 | cervix |
| 25 | chr2:171845400-171858800 | Strong transcription | Primary B cells from peripheral blood | blood |
| 26 | chr2:171846000-171898000 | Weak transcription | Psoas Muscle | Psoas |
| 27 | chr2:171846200-171901000 | Weak transcription | Fetal Brain Male | brain |
| 28 | chr2:171847200-171871600 | Strong transcription | HUES64 Cell Line | embryonic stem cell |
| 29 | chr2:171847400-171864200 | Strong transcription | Rectal Mucosa Donor 29 | rectum |
| 30 | chr2:171847400-171871600 | Strong transcription | Dnd41 | blood |
| 31 | chr2:171847400-171902600 | Weak transcription | Brain Angular Gyrus | brain |
| 32 | chr2:171847600-171871800 | Strong transcription | Placenta | Placenta |
| 33 | chr2:171847600-171872000 | Strong transcription | Primary hematopoietic stem cells short term culture | blood |
| 34 | chr2:171847600-171872000 | Strong transcription | Primary T regulatory cells fromperipheralblood | blood |
| 35 | chr2:171847800-171863400 | Strong transcription | Primary T helper cells fromperipheralblood | blood |
| 36 | chr2:171847800-171878200 | Weak transcription | Stomach Mucosa | stomach |
| 37 | chr2:171848000-171859200 | Weak transcription | A549 | lung |
| 38 | chr2:171848000-171866400 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 39 | chr2:171848200-171860200 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 40 | chr2:171848200-171869000 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 41 | chr2:171848800-171862000 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 42 | chr2:171848800-171873000 | Strong transcription | HepG2 | liver |
| 43 | chr2:171849000-171865800 | Strong transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 44 | chr2:171850400-171860800 | Weak transcription | HMEC | breast |
| 45 | chr2:171850400-171865400 | Weak transcription | Fetal Heart | heart |
| 46 | chr2:171850400-171892000 | Weak transcription | Brain Anterior Caudate | brain |
| 47 | chr2:171850600-171862000 | Weak transcription | Brain Cingulate Gyrus | brain |
| 48 | chr2:171851800-171868800 | Strong transcription | Primary B cells from cord blood | blood |
| 49 | chr2:171851800-171881800 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 50 | chr2:171852000-171862800 | Strong transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
