Variant report
| Variant | rs10193992 |
|---|---|
| Chromosome Location | chr2:171994188-171994189 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr2:171917000-172000800 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 2 | chr2:171957200-172010400 | Weak transcription | HSMM | muscle |
| 3 | chr2:171973600-172011000 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 4 | chr2:171974000-171996400 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 5 | chr2:171974000-172003200 | Weak transcription | Fetal Intestine Small | intestine |
| 6 | chr2:171974000-172003200 | Weak transcription | Fetal Thymus | thymus |
| 7 | chr2:171974200-171996400 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 8 | chr2:171974200-172002400 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 9 | chr2:171974400-172003200 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 10 | chr2:171984600-172003000 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 11 | chr2:171985600-172006200 | Weak transcription | Esophagus | oesophagus |
| 12 | chr2:171986400-171995800 | Weak transcription | Primary T cells fromperipheralblood | blood |
| 13 | chr2:171986400-171996400 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 14 | chr2:171987400-171999400 | Weak transcription | Spleen | Spleen |
| 15 | chr2:171988200-172014400 | Enhancers | Primary T helper memory cells from peripheral blood 2 | blood |
| 16 | chr2:171988400-171999800 | Enhancers | HepG2 | liver |
| 17 | chr2:171989200-171996600 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 18 | chr2:171989400-172007000 | Weak transcription | Lung | lung |
| 19 | chr2:171989800-171996800 | Weak transcription | Rectal Smooth Muscle | rectum |
| 20 | chr2:171990000-171994800 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 21 | chr2:171990000-171996400 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 22 | chr2:171990000-172016000 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 23 | chr2:171990200-171994400 | Enhancers | Primary T helper cells PMA-I stimulated | -- |
| 24 | chr2:171990200-171994800 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 25 | chr2:171990200-171997400 | Weak transcription | Stomach Smooth Muscle | stomach |
| 26 | chr2:171990400-171994600 | Weak transcription | Primary T cells from cord blood | blood |
| 27 | chr2:171990400-171995800 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 28 | chr2:171990600-172004800 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 29 | chr2:171990800-172001200 | Weak transcription | Primary B cells from cord blood | blood |
| 30 | chr2:171991200-171997400 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 31 | chr2:171991600-171996600 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 32 | chr2:171991600-171998000 | Weak transcription | Aorta | Aorta |
| 33 | chr2:171991800-171995000 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 34 | chr2:171992000-171994200 | Enhancers | Primary T helper naive cells fromperipheralblood | blood |
| 35 | chr2:171992200-171994200 | Flanking Active TSS | GM12878-XiMat | blood |
| 36 | chr2:171992200-171995800 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 37 | chr2:171992200-171997200 | Enhancers | Primary T helper 17 cells PMA-I stimulated | -- |
| 38 | chr2:171992200-171999800 | Enhancers | Primary T helper cells fromperipheralblood | blood |
| 39 | chr2:171992400-171994200 | Enhancers | Sigmoid Colon | Sigmoid Colon |
| 40 | chr2:171992800-171994200 | Enhancers | IMR90 fetal lung fibroblasts Cell Line | lung |
| 41 | chr2:171992800-171994200 | Enhancers | Primary hematopoietic stem cells short term culture | blood |
| 42 | chr2:171992800-171994200 | Enhancers | Pancreas | Pancrea |
| 43 | chr2:171993000-171994200 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
| 44 | chr2:171993000-171994200 | Enhancers | Stomach Mucosa | stomach |
| 45 | chr2:171993000-171995400 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 46 | chr2:171993000-171995800 | Weak transcription | Primary B cells from peripheral blood | blood |
| 47 | chr2:171993200-171995000 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 48 | chr2:171993200-171995400 | Enhancers | Liver | Liver |
| 49 | chr2:171993400-171994200 | Enhancers | HUES48 Cell Line | embryonic stem cell |
| 50 | chr2:171993400-171994200 | Enhancers | Primary T regulatory cells fromperipheralblood | blood |
