The 2.0 version of rSNPBase

Variant report

Variant rs9646785
Chromosome Location chr2:172015380-172015381
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:110 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:171990000-172016000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr2:171996600-172015400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr2:171996600-172015400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr2:171996600-172015600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr2:172003200-172015400 Enhancers Primary T helper naive cells fromperipheralblood blood
6 chr2:172004200-172015400 Weak transcription Breast Myoepithelial Primary Cells Breast
7 chr2:172007800-172015800 Weak transcription Lung lung
8 chr2:172011200-172015400 Weak transcription H9 Cell Line embryonic stem cell
9 chr2:172011200-172015400 Weak transcription Ovary ovary
10 chr2:172011200-172015400 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr2:172011200-172015400 Weak transcription Stomach Mucosa stomach
12 chr2:172011200-172015600 Weak transcription Gastric stomach
13 chr2:172011400-172015400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
14 chr2:172013600-172015400 Weak transcription Left Ventricle heart
15 chr2:172013800-172015800 Flanking Active TSS Dnd41 blood
16 chr2:172013800-172018200 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
17 chr2:172013800-172018200 Active TSS GM12878-XiMat blood
18 chr2:172014000-172015400 Enhancers Primary T killer memory cells from peripheral blood blood
19 chr2:172014000-172015400 Weak transcription Small Intestine intestine
20 chr2:172014000-172018200 Active TSS K562 blood
21 chr2:172014000-172018800 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
22 chr2:172014200-172018600 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr2:172014400-172015400 Enhancers Primary B cells from peripheral blood blood
24 chr2:172014400-172015800 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
25 chr2:172014400-172016200 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr2:172014400-172018200 Active TSS Brain Dorsolateral Prefrontal Cortex brain
27 chr2:172014400-172018200 Active TSS HSMMtube muscle
28 chr2:172014600-172015400 Enhancers Primary monocytes fromperipheralblood blood
29 chr2:172014600-172015400 Enhancers Aorta Aorta
30 chr2:172014600-172015400 Flanking Active TSS NHEK skin
31 chr2:172014600-172015600 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr2:172014600-172015600 Flanking Active TSS Fetal Brain Female brain
33 chr2:172014600-172015800 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr2:172014600-172015800 Flanking Active TSS Primary T cells from cord blood blood
35 chr2:172014600-172015800 Flanking Active TSS Primary T helper cells fromperipheralblood blood
36 chr2:172014600-172016000 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
37 chr2:172014600-172016000 Flanking Active TSS HUVEC blood vessel
38 chr2:172014600-172016400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr2:172014600-172018400 Active TSS Stomach Smooth Muscle stomach
40 chr2:172014600-172018600 Active TSS ES-I3 Cell Line embryonic stem cell
41 chr2:172014600-172018600 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
42 chr2:172014600-172018600 Active TSS Pancreatic Islets Pancreatic Islet
43 chr2:172014600-172018600 Active TSS HMEC breast
44 chr2:172014800-172015400 Enhancers Brain Substantia Nigra brain
45 chr2:172014800-172015600 Active TSS Primary T cells fromperipheralblood blood
46 chr2:172014800-172015600 Flanking Active TSS Rectal Smooth Muscle rectum
47 chr2:172014800-172016000 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr2:172014800-172016000 Active TSS Brain Germinal Matrix brain
49 chr2:172014800-172016400 Flanking Active TSS Primary B cells from cord blood blood
50 chr2:172014800-172016400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --

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Last update: Aug 31, 2015