Variant report
| Variant | rs1025242 |
|---|---|
| Chromosome Location | chr2:171958980-171958981 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr2:171900400-171975400 | Weak transcription | Aorta | Aorta |
| 2 | chr2:171916600-171970800 | Weak transcription | Ovary | ovary |
| 3 | chr2:171917000-172000800 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 4 | chr2:171933200-171981000 | Weak transcription | Rectal Smooth Muscle | rectum |
| 5 | chr2:171943400-171959600 | Weak transcription | Left Ventricle | heart |
| 6 | chr2:171943400-171973800 | Weak transcription | NH-A | brain |
| 7 | chr2:171944800-171977400 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 8 | chr2:171949200-171973200 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 9 | chr2:171950600-171972000 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 10 | chr2:171950600-171991200 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 11 | chr2:171952800-171959000 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 12 | chr2:171953400-171959600 | ZNF genes & repeats | GM12878-XiMat | blood |
| 13 | chr2:171954400-171970400 | Weak transcription | Hela-S3 | cervix |
| 14 | chr2:171954600-171973400 | Weak transcription | Small Intestine | intestine |
| 15 | chr2:171954600-171987200 | Weak transcription | Fetal Stomach | stomach |
| 16 | chr2:171955600-171973200 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 17 | chr2:171955800-171980800 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 18 | chr2:171956400-171980200 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 19 | chr2:171957000-171959800 | Weak transcription | Brain Anterior Caudate | brain |
| 20 | chr2:171957000-171970600 | Weak transcription | Placenta | Placenta |
| 21 | chr2:171957000-171972200 | Weak transcription | Primary T regulatory cells fromperipheralblood | blood |
| 22 | chr2:171957000-171975400 | Weak transcription | Right Ventricle | heart |
| 23 | chr2:171957200-171959000 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 24 | chr2:171957200-171959200 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 25 | chr2:171957200-171959200 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 26 | chr2:171957200-171959200 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 27 | chr2:171957200-171959600 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 28 | chr2:171957200-171959600 | Weak transcription | Primary T cells fromperipheralblood | blood |
| 29 | chr2:171957200-171963400 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 30 | chr2:171957200-171963400 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 31 | chr2:171957200-171963600 | Weak transcription | Fetal Intestine Large | intestine |
| 32 | chr2:171957200-171965800 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 33 | chr2:171957200-171966400 | Weak transcription | Psoas Muscle | Psoas |
| 34 | chr2:171957200-171966800 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 35 | chr2:171957200-171967000 | Weak transcription | Fetal Thymus | thymus |
| 36 | chr2:171957200-171967800 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 37 | chr2:171957200-171967800 | Weak transcription | Fetal Intestine Small | intestine |
| 38 | chr2:171957200-171968200 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 39 | chr2:171957200-171970800 | Weak transcription | Primary B cells from cord blood | blood |
| 40 | chr2:171957200-171970800 | Weak transcription | Liver | Liver |
| 41 | chr2:171957200-171972000 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 42 | chr2:171957200-171972600 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 43 | chr2:171957200-171973400 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 44 | chr2:171957200-171973800 | Weak transcription | Esophagus | oesophagus |
| 45 | chr2:171957200-171975800 | Weak transcription | Fetal Lung | lung |
| 46 | chr2:171957200-171976200 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 47 | chr2:171957200-171977800 | Weak transcription | Thymus | Thymus |
| 48 | chr2:171957200-171978000 | Weak transcription | NHEK | skin |
| 49 | chr2:171957200-171980000 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 50 | chr2:171957200-171980000 | Weak transcription | Stomach Smooth Muscle | stomach |
