Variant report

Variant rs2195117
Chromosome Location chr2:171880570-171880571
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:171830600-171902800 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr2:171830800-171891400 Weak transcription Spleen Spleen
3 chr2:171831400-171916200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr2:171841000-171895800 Weak transcription H9 Cell Line embryonic stem cell
5 chr2:171841600-171940000 Weak transcription Right Ventricle heart
6 chr2:171842200-171892000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr2:171842600-171912000 Weak transcription Placenta Amnion Placenta Amnion
8 chr2:171846000-171898000 Weak transcription Psoas Muscle Psoas
9 chr2:171846200-171901000 Weak transcription Fetal Brain Male brain
10 chr2:171847400-171902600 Weak transcription Brain Angular Gyrus brain
11 chr2:171850400-171892000 Weak transcription Brain Anterior Caudate brain
12 chr2:171851800-171881800 Weak transcription Pancreatic Islets Pancreatic Islet
13 chr2:171853200-171898800 Weak transcription Aorta Aorta
14 chr2:171858000-171891800 Weak transcription Fetal Brain Female brain
15 chr2:171858000-171892000 Weak transcription Brain Substantia Nigra brain
16 chr2:171859400-171892000 Weak transcription Skeletal Muscle Male skeletal muscle
17 chr2:171859600-171897000 Weak transcription Esophagus oesophagus
18 chr2:171862200-171890600 Weak transcription Primary T killer naive cells fromperipheralblood blood
19 chr2:171862600-171918400 Weak transcription Brain Germinal Matrix brain
20 chr2:171862800-171885400 Weak transcription iPS-15b Cell Line embryonic stem cell
21 chr2:171862800-171885800 Weak transcription Ovary ovary
22 chr2:171862800-171899000 Weak transcription Brain Cingulate Gyrus brain
23 chr2:171862800-171931200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
24 chr2:171863200-171886200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
25 chr2:171863200-171896200 Weak transcription Hela-S3 cervix
26 chr2:171865800-171905000 Weak transcription Fetal Heart heart
27 chr2:171867800-171898600 Weak transcription Rectal Smooth Muscle rectum
28 chr2:171867800-171898800 Weak transcription Colonic Mucosa Colon
29 chr2:171867800-171916200 Weak transcription Gastric stomach
30 chr2:171868000-171890800 Weak transcription Skeletal Muscle Female skeletal muscle
31 chr2:171868200-171891800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
32 chr2:171871200-171897800 Weak transcription Pancreas Pancrea
33 chr2:171871400-171882000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
34 chr2:171871400-171883800 Weak transcription Primary neutrophils fromperipheralblood blood
35 chr2:171871400-171891200 Weak transcription Colon Smooth Muscle Colon
36 chr2:171871400-171898000 Weak transcription Lung lung
37 chr2:171871600-171892000 Weak transcription Brain Inferior Temporal Lobe brain
38 chr2:171873000-171891600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
39 chr2:171874800-171916200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr2:171875000-171892200 Strong transcription Monocytes-CD14+_RO01746 blood
41 chr2:171876600-171885800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
42 chr2:171877000-171881400 Strong transcription HepG2 liver
43 chr2:171877200-171880600 Strong transcription Primary B cells from peripheral blood blood
44 chr2:171877200-171880800 Strong transcription GM12878-XiMat blood
45 chr2:171877400-171890400 Weak transcription Primary T helper naive cells from peripheral blood blood
46 chr2:171877800-171887400 Weak transcription Primary T killer memory cells from peripheral blood blood
47 chr2:171877800-171892200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
48 chr2:171878000-171891800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
49 chr2:171878000-171943200 Weak transcription Small Intestine intestine
50 chr2:171878200-171892200 Weak transcription HUVEC blood vessel

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