The 2.0 version of rSNPBase

Variant report

Variant rs2356608
Chromosome Location chr2:171981928-171981929
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:171917000-172000800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
2 chr2:171950600-171991200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr2:171954600-171987200 Weak transcription Fetal Stomach stomach
4 chr2:171957200-171982400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
5 chr2:171957200-171986000 Weak transcription Spleen Spleen
6 chr2:171957200-172010400 Weak transcription HSMM muscle
7 chr2:171968800-171985400 Weak transcription Left Ventricle heart
8 chr2:171971200-171993000 Weak transcription Gastric stomach
9 chr2:171973600-172011000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
10 chr2:171973800-171989200 Weak transcription K562 blood
11 chr2:171973800-171990400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
12 chr2:171974000-171984400 Weak transcription Primary neutrophils fromperipheralblood blood
13 chr2:171974000-171988600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
14 chr2:171974000-171990400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr2:171974000-171996400 Weak transcription H1 Cell Line embryonic stem cell
16 chr2:171974000-172003200 Weak transcription Fetal Intestine Small intestine
17 chr2:171974000-172003200 Weak transcription Fetal Thymus thymus
18 chr2:171974200-171984800 Weak transcription GM12878-XiMat blood
19 chr2:171974200-171985000 Weak transcription Primary B cells from cord blood blood
20 chr2:171974200-171993600 Weak transcription Primary hematopoietic stem cells blood
21 chr2:171974200-171996400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr2:171974200-172002400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr2:171974400-171984600 Weak transcription Primary monocytes fromperipheralblood blood
24 chr2:171974400-171985000 Weak transcription Primary hematopoietic stem cells short term culture blood
25 chr2:171974400-171992400 Weak transcription Sigmoid Colon Sigmoid Colon
26 chr2:171974400-172003200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr2:171974600-171984800 Weak transcription Monocytes-CD14+_RO01746 blood
28 chr2:171976000-171983400 Weak transcription Primary B cells from peripheral blood blood
29 chr2:171976000-171988800 Weak transcription Colon Smooth Muscle Colon
30 chr2:171976000-171990400 Weak transcription Aorta Aorta
31 chr2:171976400-171983800 Weak transcription Primary T killer naive cells fromperipheralblood blood
32 chr2:171976400-171985600 Weak transcription Primary T cells from cord blood blood
33 chr2:171976400-171993400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
34 chr2:171977600-171985800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
35 chr2:171979000-171985200 Weak transcription Primary T helper naive cells fromperipheralblood blood
36 chr2:171979000-171987000 Weak transcription Primary T killer memory cells from peripheral blood blood
37 chr2:171979000-171990400 Weak transcription Primary T helper naive cells from peripheral blood blood
38 chr2:171980000-171982000 Enhancers Primary T helper cells fromperipheralblood blood
39 chr2:171980400-171983400 Weak transcription Primary T cells fromperipheralblood blood
40 chr2:171980400-171988600 Weak transcription Pancreas Pancrea
41 chr2:171980400-171988800 Weak transcription Ovary ovary
42 chr2:171980400-171989200 Weak transcription Fetal Adrenal Gland Adrenal Gland
43 chr2:171980800-171982000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
44 chr2:171981000-171982000 Enhancers Primary T helper cells PMA-I stimulated --
45 chr2:171981200-171982000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
46 chr2:171981200-171982200 Enhancers Small Intestine intestine
47 chr2:171981400-171988200 Weak transcription Liver Liver
48 chr2:171981600-171982000 Enhancers Cortex derived primary cultured neurospheres brain
49 chr2:171981600-171989000 Weak transcription Rectal Smooth Muscle rectum
50 chr2:171981800-171982200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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Last update: Aug 31, 2015