Variant report

Variant rs12998296
Chromosome Location chr2:171906091-171906092
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:171831400-171916200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr2:171841600-171940000 Weak transcription Right Ventricle heart
3 chr2:171842600-171912000 Weak transcription Placenta Amnion Placenta Amnion
4 chr2:171862600-171918400 Weak transcription Brain Germinal Matrix brain
5 chr2:171862800-171931200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
6 chr2:171867800-171916200 Weak transcription Gastric stomach
7 chr2:171874800-171916200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr2:171878000-171943200 Weak transcription Small Intestine intestine
9 chr2:171878800-171940000 Weak transcription Stomach Mucosa stomach
10 chr2:171883600-171916200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
11 chr2:171884200-171913000 Strong transcription Liver Liver
12 chr2:171888200-171913800 Strong transcription HepG2 liver
13 chr2:171890400-171912800 Strong transcription Placenta Placenta
14 chr2:171890400-171917600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
15 chr2:171891000-171913400 Strong transcription Cortex derived primary cultured neurospheres brain
16 chr2:171891400-171911600 Strong transcription Rectal Mucosa Donor 29 rectum
17 chr2:171892000-171906600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr2:171892400-171911800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr2:171892400-171943400 Weak transcription Spleen Spleen
20 chr2:171892600-171916200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
21 chr2:171892600-171918200 Strong transcription Monocytes-CD14+_RO01746 blood
22 chr2:171892800-171907600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr2:171892800-171916200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr2:171892800-171918000 Weak transcription NHLF lung
25 chr2:171893000-171913600 Weak transcription Pancreatic Islets Pancreatic Islet
26 chr2:171893200-171918400 Weak transcription Fetal Brain Female brain
27 chr2:171894800-171912400 Strong transcription Primary neutrophils fromperipheralblood blood
28 chr2:171895000-171912400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr2:171895000-171918000 Strong transcription Primary monocytes fromperipheralblood blood
30 chr2:171895400-171917600 Strong transcription Rectal Mucosa Donor 31 rectum
31 chr2:171895600-171907000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr2:171895600-171912400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr2:171895800-171911200 Strong transcription Fetal Intestine Large intestine
34 chr2:171895800-171914200 Strong transcription HUES6 Cell Line embryonic stem cell
35 chr2:171895800-171918000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr2:171896400-171912400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr2:171897200-171917600 Strong transcription Primary B cells from cord blood blood
38 chr2:171897800-171909800 Strong transcription HSMM muscle
39 chr2:171898000-171908400 Weak transcription Hela-S3 cervix
40 chr2:171898200-171916200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr2:171898200-171916200 Weak transcription Ovary ovary
42 chr2:171898200-171916200 Weak transcription Thymus Thymus
43 chr2:171898200-171916400 Weak transcription Lung lung
44 chr2:171898200-171928800 Weak transcription Fetal Stomach stomach
45 chr2:171898200-171946200 Weak transcription Pancreas Pancrea
46 chr2:171899000-171906200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
47 chr2:171899400-171912200 Strong transcription Primary hematopoietic stem cells short term culture blood
48 chr2:171899800-171914800 Strong transcription Primary B cells from peripheral blood blood
49 chr2:171899800-171916200 Strong transcription Fetal Thymus thymus
50 chr2:171900000-171907400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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