Variant report
| Variant | rs1344236 |
|---|---|
| Chromosome Location | chr2:171984465-171984466 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr2:171917000-172000800 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 2 | chr2:171950600-171991200 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 3 | chr2:171954600-171987200 | Weak transcription | Fetal Stomach | stomach |
| 4 | chr2:171957200-171986000 | Weak transcription | Spleen | Spleen |
| 5 | chr2:171957200-172010400 | Weak transcription | HSMM | muscle |
| 6 | chr2:171968800-171985400 | Weak transcription | Left Ventricle | heart |
| 7 | chr2:171971200-171993000 | Weak transcription | Gastric | stomach |
| 8 | chr2:171973600-172011000 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 9 | chr2:171973800-171989200 | Weak transcription | K562 | blood |
| 10 | chr2:171973800-171990400 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 11 | chr2:171974000-171988600 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 12 | chr2:171974000-171990400 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 13 | chr2:171974000-171996400 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 14 | chr2:171974000-172003200 | Weak transcription | Fetal Intestine Small | intestine |
| 15 | chr2:171974000-172003200 | Weak transcription | Fetal Thymus | thymus |
| 16 | chr2:171974200-171984800 | Weak transcription | GM12878-XiMat | blood |
| 17 | chr2:171974200-171985000 | Weak transcription | Primary B cells from cord blood | blood |
| 18 | chr2:171974200-171993600 | Weak transcription | Primary hematopoietic stem cells | blood |
| 19 | chr2:171974200-171996400 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 20 | chr2:171974200-172002400 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 21 | chr2:171974400-171984600 | Weak transcription | Primary monocytes fromperipheralblood | blood |
| 22 | chr2:171974400-171985000 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 23 | chr2:171974400-171992400 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 24 | chr2:171974400-172003200 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 25 | chr2:171974600-171984800 | Weak transcription | Monocytes-CD14+_RO01746 | blood |
| 26 | chr2:171976000-171988800 | Weak transcription | Colon Smooth Muscle | Colon |
| 27 | chr2:171976000-171990400 | Weak transcription | Aorta | Aorta |
| 28 | chr2:171976400-171985600 | Weak transcription | Primary T cells from cord blood | blood |
| 29 | chr2:171976400-171993400 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 30 | chr2:171977600-171985800 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 31 | chr2:171979000-171985200 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 32 | chr2:171979000-171987000 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 33 | chr2:171979000-171990400 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 34 | chr2:171980400-171988600 | Weak transcription | Pancreas | Pancrea |
| 35 | chr2:171980400-171988800 | Weak transcription | Ovary | ovary |
| 36 | chr2:171980400-171989200 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 37 | chr2:171981400-171988200 | Weak transcription | Liver | Liver |
| 38 | chr2:171981600-171989000 | Weak transcription | Rectal Smooth Muscle | rectum |
| 39 | chr2:171982000-171991600 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 40 | chr2:171982000-171993400 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 41 | chr2:171982200-171993000 | Weak transcription | Small Intestine | intestine |
| 42 | chr2:171983000-171986400 | Enhancers | Primary T helper memory cells from peripheral blood 2 | blood |
| 43 | chr2:171983400-171985400 | Weak transcription | Primary T regulatory cells fromperipheralblood | blood |
| 44 | chr2:171983600-171985400 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 45 | chr2:171983600-171985400 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 46 | chr2:171983800-171984600 | Enhancers | Primary T killer naive cells fromperipheralblood | blood |
| 47 | chr2:171983800-171985000 | Weak transcription | Primary B cells from peripheral blood | blood |
| 48 | chr2:171983800-171985400 | Weak transcription | Psoas Muscle | Psoas |
| 49 | chr2:171983800-171986000 | Weak transcription | Primary T cells fromperipheralblood | blood |
| 50 | chr2:171984400-171986200 | Enhancers | Primary neutrophils fromperipheralblood | blood |
