The 2.0 version of rSNPBase

Variant report

Variant rs9634685
Chromosome Location chr13:52023328-52023329
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:108 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:51949400-52025000 Weak transcription Fetal Muscle Leg muscle
2 chr13:51950000-52025200 Weak transcription Fetal Muscle Trunk muscle
3 chr13:51963200-52024800 Weak transcription Fetal Intestine Large intestine
4 chr13:51971800-52025000 Weak transcription Fetal Stomach stomach
5 chr13:51984400-52024800 Weak transcription Placenta Amnion Placenta Amnion
6 chr13:51988800-52024400 Weak transcription Rectal Smooth Muscle rectum
7 chr13:51992400-52025400 Weak transcription Esophagus oesophagus
8 chr13:51995400-52023400 Weak transcription Fetal Kidney kidney
9 chr13:51995400-52024600 Weak transcription Brain Inferior Temporal Lobe brain
10 chr13:51995600-52023400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
11 chr13:51995600-52025000 Weak transcription Right Ventricle heart
12 chr13:51995600-52025600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr13:51997000-52025200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
14 chr13:51997400-52024400 Weak transcription Thymus Thymus
15 chr13:51997600-52023600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
16 chr13:52000600-52025200 Weak transcription Small Intestine intestine
17 chr13:52001400-52024600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
18 chr13:52001600-52024400 Weak transcription Brain Cingulate Gyrus brain
19 chr13:52002200-52024000 Weak transcription Brain Anterior Caudate brain
20 chr13:52003600-52024200 Weak transcription NHLF lung
21 chr13:52003800-52023400 Weak transcription H1 Cell Line embryonic stem cell
22 chr13:52003800-52024600 Weak transcription Skeletal Muscle Female skeletal muscle
23 chr13:52004200-52024800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
24 chr13:52004400-52023400 Weak transcription Primary monocytes fromperipheralblood blood
25 chr13:52004400-52024200 Weak transcription Adipose Nuclei Adipose
26 chr13:52004400-52024600 Weak transcription Fetal Adrenal Gland Adrenal Gland
27 chr13:52004600-52023400 Weak transcription Primary B cells from peripheral blood blood
28 chr13:52004600-52023600 Weak transcription Cortex derived primary cultured neurospheres brain
29 chr13:52004600-52024200 Weak transcription Primary T cells fromperipheralblood blood
30 chr13:52004600-52024200 Weak transcription Duodenum Mucosa Duodenum
31 chr13:52004600-52024800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
32 chr13:52004600-52025200 Weak transcription Sigmoid Colon Sigmoid Colon
33 chr13:52004800-52023400 Weak transcription Primary hematopoietic stem cells short term culture blood
34 chr13:52004800-52023400 Weak transcription Primary T helper cells fromperipheralblood blood
35 chr13:52004800-52023600 Weak transcription Rectal Mucosa Donor 29 rectum
36 chr13:52005000-52023400 Weak transcription Primary T regulatory cells fromperipheralblood blood
37 chr13:52005600-52023400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
38 chr13:52005600-52023600 Weak transcription NH-A brain
39 chr13:52008400-52023800 Weak transcription Hela-S3 cervix
40 chr13:52010400-52024400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
41 chr13:52012200-52025400 Weak transcription Left Ventricle heart
42 chr13:52013000-52024000 Weak transcription Fetal Brain Female brain
43 chr13:52013600-52025400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
44 chr13:52015000-52025000 Weak transcription Brain Germinal Matrix brain
45 chr13:52015200-52023400 Weak transcription K562 blood
46 chr13:52016800-52023400 Weak transcription Pancreas Pancrea
47 chr13:52016800-52025200 Weak transcription Psoas Muscle Psoas
48 chr13:52017000-52024400 Weak transcription Fetal Intestine Small intestine
49 chr13:52017000-52025400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
50 chr13:52018800-52024800 Weak transcription Stomach Smooth Muscle stomach

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Last update: Aug 31, 2015