Variant report

Variant	rs9791207
Chromosome Location	chr6:69321871-69321872
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 48 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:45)

rs_ID	r²[population]
rs1033520	0.84[JPT][hapmap]
rs10484791	0.89[JPT][hapmap]
rs10945138	0.84[CHB][hapmap];0.90[JPT][hapmap]
rs10945139	0.90[JPT][hapmap]
rs11752398	0.84[CHB][hapmap];0.89[JPT][hapmap]
rs11752837	0.84[CHB][hapmap];0.90[JPT][hapmap]
rs12154008	0.90[JPT][hapmap]
rs12201488	0.84[CHB][hapmap];0.90[JPT][hapmap]
rs12210045	0.84[CHB][hapmap]
rs13218712	0.84[CHB][hapmap];0.89[JPT][hapmap]
rs2246093	0.94[ASN][1000 genomes]
rs2246104	0.94[CHB][hapmap];0.94[JPT][hapmap];0.92[ASN][1000 genomes]
rs2253759	0.89[JPT][hapmap]
rs2253866	0.90[JPT][hapmap]
rs2254654	0.83[CHB][hapmap];0.94[JPT][hapmap]
rs2585592	0.85[JPT][hapmap]
rs2585597	0.85[JPT][hapmap]
rs2585598	0.84[JPT][hapmap]
rs2585599	0.80[JPT][hapmap]
rs2585600	0.80[JPT][hapmap]
rs2585604	0.81[JPT][hapmap]
rs2585614	0.99[ASN][1000 genomes]
rs2585621	0.84[CHB][hapmap];0.94[JPT][hapmap]
rs2585622	0.84[CHB][hapmap];0.94[JPT][hapmap]
rs2585626	0.90[JPT][hapmap]
rs2585627	0.90[JPT][hapmap]
rs2746125	0.90[JPT][hapmap]
rs2746127	0.85[JPT][hapmap]
rs2746137	0.83[CHB][hapmap];0.89[JPT][hapmap]
rs2746141	0.84[JPT][hapmap]
rs2802676	0.89[JPT][hapmap]
rs2802680	0.81[JPT][hapmap]
rs2802683	0.81[JPT][hapmap]
rs2802687	0.85[JPT][hapmap]
rs2802688	0.85[JPT][hapmap]
rs2802689	0.89[JPT][hapmap]
rs2802691	0.84[JPT][hapmap]
rs2802693	0.89[JPT][hapmap]
rs2802694	0.85[JPT][hapmap]
rs2802701	0.94[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs3121775	0.85[JPT][hapmap]
rs715294	0.84[CHB][hapmap];0.89[JPT][hapmap]
rs7745837	0.84[CHB][hapmap];0.90[JPT][hapmap]
rs7768591	0.84[CHB][hapmap];0.89[JPT][hapmap]
rs9360356	0.84[CEU][hapmap];0.82[JPT][hapmap];0.80[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv886130	chr6:68950298-69531957	Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Bivalent Enhancer Bivalent/Poised TSS Active TSS Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
2	nsv830680	chr6:69192214-69351103	Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Enhancers Bivalent Enhancer Weak transcription Genic enhancers ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
3	nsv970727	chr6:69319985-69327051	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:69321600-69323200	Weak transcription	Primary monocytes fromperipheralblood	blood
2	chr6:69321800-69323200	Weak transcription	Monocytes-CD14+_RO01746	blood

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