The 2.0 version of rSNPBase

Variant report

Variant rs9819006
Chromosome Location chr3:34058419-34058420
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:34054000-34059600 Enhancers Fetal Brain Male brain
2 chr3:34055600-34058600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
3 chr3:34055600-34075000 Weak transcription K562 blood
4 chr3:34056600-34058800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
5 chr3:34056800-34058600 Enhancers Fetal Thymus thymus
6 chr3:34056800-34060000 Enhancers Primary T cells fromperipheralblood blood
7 chr3:34056800-34060000 Enhancers Primary Natural Killer cells fromperipheralblood blood
8 chr3:34057000-34058600 Weak transcription Fetal Brain Female brain
9 chr3:34057000-34060000 Enhancers Primary T helper naive cells fromperipheralblood blood
10 chr3:34057200-34058600 Enhancers Primary T cells from cord blood blood
11 chr3:34057200-34059800 Enhancers Primary T killer memory cells from peripheral blood blood
12 chr3:34057200-34060600 Enhancers Primary T helper cells PMA-I stimulated --
13 chr3:34057400-34059400 Enhancers Primary neutrophils fromperipheralblood blood
14 chr3:34057400-34059800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
15 chr3:34057400-34060000 Enhancers Primary T helper naive cells from peripheral blood blood
16 chr3:34057400-34060000 Enhancers Primary T killer naive cells fromperipheralblood blood
17 chr3:34057400-34060200 Enhancers Primary monocytes fromperipheralblood blood
18 chr3:34057600-34059000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr3:34057600-34059400 Enhancers HMEC breast
20 chr3:34057600-34060800 Enhancers Primary B cells from peripheral blood blood
21 chr3:34057800-34058800 Flanking Active TSS Dnd41 blood
22 chr3:34057800-34059200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr3:34057800-34059400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
24 chr3:34058200-34058600 Enhancers GM12878-XiMat blood
25 chr3:34058200-34058800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr3:34058200-34058800 Enhancers Primary mononuclear cells fromperipheralblood Blood
27 chr3:34058200-34059000 Enhancers Breast Myoepithelial Primary Cells Breast
28 chr3:34058200-34059000 Enhancers Primary T regulatory cells fromperipheralblood blood
29 chr3:34058200-34059000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr3:34058200-34059000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
31 chr3:34058200-34059200 Enhancers NHEK skin
32 chr3:34058200-34059400 Enhancers Primary B cells from cord blood blood
33 chr3:34058400-34058600 Enhancers Primary hematopoietic stem cells blood
34 chr3:34058400-34058600 Enhancers Primary T helper cells fromperipheralblood blood
35 chr3:34058400-34058800 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
36 chr3:34058400-34058800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr3:34058400-34058800 Flanking Active TSS Thymus Thymus
38 chr3:34058400-34059000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr3:34058400-34059000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
40 chr3:34058400-34059000 Enhancers NHDF-Ad bronchial
41 chr3:34058400-34059200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
42 chr3:34058400-34059200 Flanking Active TSS Monocytes-CD14+_RO01746 blood

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Last update: Aug 31, 2015