Variant report

Variant	rs9993323
Chromosome Location	chr4:110940706-110940707
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 66 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:65)

rs_ID	r²[population]
rs10000762	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs10002835	1.00[EUR][1000 genomes]
rs10003648	1.00[EUR][1000 genomes]
rs10008969	1.00[CEU][hapmap]
rs10011256	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs10015673	1.00[EUR][1000 genomes]
rs10018671	1.00[EUR][1000 genomes]
rs10018709	1.00[EUR][1000 genomes]
rs10021246	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs10021699	1.00[CEU][hapmap]
rs10023766	1.00[EUR][1000 genomes]
rs10024160	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs10025706	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs10027781	1.00[EUR][1000 genomes]
rs10028950	1.00[EUR][1000 genomes]
rs10029493	1.00[EUR][1000 genomes]
rs10029765	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs10029774	1.00[EUR][1000 genomes]
rs10032001	1.00[EUR][1000 genomes]
rs10034447	1.00[EUR][1000 genomes]
rs11569065	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11569134	0.91[YRI][hapmap];0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12331156	1.00[EUR][1000 genomes]
rs12386405	1.00[EUR][1000 genomes]
rs17040963	1.00[CEU][hapmap]
rs17041311	1.00[CEU][hapmap]
rs17041322	1.00[CEU][hapmap]
rs1860131	1.00[CEU][hapmap]
rs28372160	1.00[EUR][1000 genomes]
rs28387677	1.00[EUR][1000 genomes]
rs28414645	1.00[EUR][1000 genomes]
rs28419786	1.00[EUR][1000 genomes]
rs28553469	1.00[EUR][1000 genomes]
rs28592692	1.00[EUR][1000 genomes]
rs28599924	1.00[EUR][1000 genomes]
rs28659909	1.00[EUR][1000 genomes]
rs28662394	1.00[EUR][1000 genomes]
rs28680960	1.00[EUR][1000 genomes]
rs28684716	1.00[EUR][1000 genomes]
rs28687523	1.00[EUR][1000 genomes]
rs28715029	1.00[EUR][1000 genomes]
rs28719677	1.00[EUR][1000 genomes]
rs28729403	1.00[EUR][1000 genomes]
rs28733095	1.00[EUR][1000 genomes]
rs28780412	1.00[EUR][1000 genomes]
rs28803170	1.00[EUR][1000 genomes]
rs28888150	1.00[EUR][1000 genomes]
rs28889289	1.00[EUR][1000 genomes]
rs28892978	1.00[EUR][1000 genomes]
rs41397647	1.00[EUR][1000 genomes]
rs41475346	1.00[EUR][1000 genomes]
rs59590892	1.00[EUR][1000 genomes]
rs6533490	1.00[EUR][1000 genomes]
rs72896557	1.00[EUR][1000 genomes]
rs72898536	1.00[EUR][1000 genomes]
rs72898540	1.00[EUR][1000 genomes]
rs72898560	1.00[EUR][1000 genomes]
rs7668395	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs7691725	1.00[CEU][hapmap]
rs9307346	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs9990841	1.00[CEU][hapmap]
rs9991664	1.00[EUR][1000 genomes]
rs9992217	1.00[EUR][1000 genomes]
rs9992709	1.00[EUR][1000 genomes]
rs9994891	1.00[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2763384	chr4:110939666-110942596	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:110930400-110941600	Weak transcription	Fetal Heart	heart
2	chr4:110930800-110941600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
3	chr4:110931000-110941600	Weak transcription	HUES6 Cell Line	embryonic stem cell
4	chr4:110935400-110941200	Weak transcription	HUES48 Cell Line	embryonic stem cell
5	chr4:110935600-110941200	Weak transcription	Fetal Kidney	kidney
6	chr4:110935800-110941000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
7	chr4:110938200-110941200	Weak transcription	iPS-20b Cell Line	embryonic stem cell

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