The 2.0 version of rSNPBase

Variant report

Variant rs10434889
Chromosome Location chr6:143464455-143464456
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:143441200-143479000 Weak transcription NHLF lung
2 chr6:143443800-143498800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr6:143444600-143516400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr6:143445800-143479200 Weak transcription Lung lung
5 chr6:143448400-143487400 Weak transcription Rectal Mucosa Donor 29 rectum
6 chr6:143452000-143497000 Weak transcription Fetal Stomach stomach
7 chr6:143452200-143477800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr6:143453000-143465400 Weak transcription Rectal Mucosa Donor 31 rectum
9 chr6:143453000-143474200 Weak transcription ES-I3 Cell Line embryonic stem cell
10 chr6:143453000-143481600 Weak transcription Right Ventricle heart
11 chr6:143453000-143497200 Weak transcription Pancreas Pancrea
12 chr6:143453000-143508600 Weak transcription Fetal Lung lung
13 chr6:143453000-143510600 Weak transcription Brain Inferior Temporal Lobe brain
14 chr6:143453200-143470800 Weak transcription Primary neutrophils fromperipheralblood blood
15 chr6:143457000-143465400 Weak transcription HSMMtube muscle
16 chr6:143457200-143470800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr6:143458200-143486600 Weak transcription Aorta Aorta
18 chr6:143458600-143468000 Weak transcription Fetal Intestine Small intestine
19 chr6:143458600-143479200 Weak transcription Gastric stomach
20 chr6:143458800-143477800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
21 chr6:143458800-143529200 Weak transcription Primary T cells from cord blood blood
22 chr6:143459200-143477800 Weak transcription Left Ventricle heart
23 chr6:143459200-143477800 Weak transcription NHEK skin
24 chr6:143459200-143479000 Weak transcription Ovary ovary
25 chr6:143459200-143479200 Weak transcription Duodenum Smooth Muscle Duodenum
26 chr6:143459200-143484200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
27 chr6:143459400-143468200 Weak transcription HepG2 liver
28 chr6:143459400-143479200 Weak transcription Adipose Nuclei Adipose
29 chr6:143459600-143484000 Weak transcription HUES64 Cell Line embryonic stem cell
30 chr6:143459600-143486600 Weak transcription Duodenum Mucosa Duodenum
31 chr6:143459600-143505400 Weak transcription HUES48 Cell Line embryonic stem cell
32 chr6:143459800-143477800 Weak transcription HMEC breast
33 chr6:143461000-143487400 Weak transcription Brain Cingulate Gyrus brain
34 chr6:143461800-143465200 Weak transcription Primary T helper cells PMA-I stimulated --
35 chr6:143462000-143467000 Weak transcription iPS-20b Cell Line embryonic stem cell
36 chr6:143462200-143467800 Weak transcription K562 blood
37 chr6:143462200-143468400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr6:143462200-143470600 Weak transcription Breast Myoepithelial Primary Cells Breast
39 chr6:143462200-143497800 Weak transcription Cortex derived primary cultured neurospheres brain
40 chr6:143462600-143468000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr6:143462600-143468400 Weak transcription HUES6 Cell Line embryonic stem cell
42 chr6:143462600-143477800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
43 chr6:143462800-143479200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr6:143463000-143467000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr6:143463000-143467000 Weak transcription Osteobl bone
46 chr6:143463000-143508400 Weak transcription Stomach Smooth Muscle stomach
47 chr6:143463600-143468400 Weak transcription Fetal Intestine Large intestine
48 chr6:143463800-143467600 Weak transcription Liver Liver
49 chr6:143463800-143476400 Weak transcription Psoas Muscle Psoas
50 chr6:143464000-143467200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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Last update: Aug 31, 2015