Variant report

Variant	rs9403444
Chromosome Location	chr6:143434361-143434362
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:143424126..143427059-chr6:143431274..143435341,4	K562	blood:

Extended variants
information (count: 59 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:59)

rs_ID	r²[population]
rs10434867	1.00[ASN][1000 genomes]
rs10434868	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs10434889	0.88[ASN][1000 genomes]
rs11155280	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs12055784	1.00[JPT][hapmap]
rs1413625	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17072255	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs17072283	1.00[CHB][hapmap]
rs17072288	1.00[CHB][hapmap]
rs17590908	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17628867	0.82[ASN][1000 genomes]
rs17628922	1.00[ASN][1000 genomes]
rs17629061	1.00[CHB][hapmap]
rs6919707	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs6927915	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs6935786	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs6936376	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs73777873	1.00[ASN][1000 genomes]
rs73777876	1.00[ASN][1000 genomes]
rs73777888	0.96[ASN][1000 genomes]
rs7775541	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs9321893	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs9373374	0.96[ASN][1000 genomes]
rs9373375	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs9376721	0.83[ASN][1000 genomes]
rs9376722	0.83[ASN][1000 genomes]
rs9376723	1.00[ASN][1000 genomes]
rs9376724	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs9376725	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs9376728	1.00[CHB][hapmap]
rs9386018	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9386020	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9386023	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs9386024	0.96[ASN][1000 genomes]
rs9390051	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9390052	1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs9390055	0.82[ASN][1000 genomes]
rs9390056	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs9390057	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs9390058	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs9390059	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs9390060	0.96[ASN][1000 genomes]
rs9390062	1.00[CHB][hapmap]
rs9399420	0.82[ASN][1000 genomes]
rs9399421	1.00[ASN][1000 genomes]
rs9399422	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs9399424	0.96[ASN][1000 genomes]
rs9403439	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9403440	0.83[ASN][1000 genomes]
rs9403441	0.83[ASN][1000 genomes]
rs9403442	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9403445	1.00[ASN][1000 genomes]
rs9403446	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs9403449	0.96[ASN][1000 genomes]
rs9403453	1.00[CHB][hapmap]
rs9403454	1.00[CHB][hapmap]
rs9403457	1.00[CHB][hapmap]
rs9484706	0.96[ASN][1000 genomes]
rs9496530	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]

No data

Chromatin state (count:30 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:143389600-143437000	Weak transcription	HSMM	muscle
2	chr6:143408600-143445400	Weak transcription	Aorta	Aorta
3	chr6:143408600-143452600	Weak transcription	Right Ventricle	heart
4	chr6:143417800-143445200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
5	chr6:143422800-143441600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr6:143426200-143447400	Weak transcription	Brain Hippocampus Middle	brain
7	chr6:143427600-143451800	Weak transcription	Left Ventricle	heart
8	chr6:143428000-143437800	Weak transcription	K562	blood
9	chr6:143428400-143452000	Weak transcription	Duodenum Smooth Muscle	Duodenum
10	chr6:143429400-143435600	Weak transcription	Fetal Intestine Small	intestine
11	chr6:143430200-143435600	Weak transcription	Adipose Nuclei	Adipose
12	chr6:143430200-143442200	Weak transcription	HSMMtube	muscle
13	chr6:143432000-143436800	Weak transcription	Fetal Brain Male	brain
14	chr6:143432000-143440600	Weak transcription	Sigmoid Colon	Sigmoid Colon
15	chr6:143432000-143452000	Weak transcription	Ovary	ovary
16	chr6:143432800-143444000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
17	chr6:143432800-143450800	Weak transcription	Muscle Satellite Cultured Cells	--
18	chr6:143433000-143434800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
19	chr6:143433000-143445200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
20	chr6:143433000-143448400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
21	chr6:143433200-143434800	Enhancers	Liver	Liver
22	chr6:143433200-143441600	Weak transcription	NHEK	skin
23	chr6:143433400-143434400	Enhancers	Fetal Heart	heart
24	chr6:143433400-143435000	Enhancers	HepG2	liver
25	chr6:143433400-143446400	Weak transcription	NH-A	brain
26	chr6:143433400-143447600	Weak transcription	HMEC	breast
27	chr6:143433600-143434800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
28	chr6:143434000-143434600	Enhancers	Fetal Intestine Large	intestine
29	chr6:143434000-143436600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
30	chr6:143434200-143434600	Enhancers	Placenta	Placenta

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