The 2.0 version of rSNPBase

Variant report

Variant rs9386024
Chromosome Location chr6:143460552-143460553
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:143441200-143479000 Weak transcription NHLF lung
2 chr6:143443600-143462200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr6:143443800-143498800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr6:143444600-143516400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr6:143445800-143479200 Weak transcription Lung lung
6 chr6:143448400-143487400 Weak transcription Rectal Mucosa Donor 29 rectum
7 chr6:143452000-143497000 Weak transcription Fetal Stomach stomach
8 chr6:143452200-143477800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr6:143452800-143461400 Weak transcription Fetal Heart heart
10 chr6:143452800-143461800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
11 chr6:143452800-143463800 Weak transcription H1 Cell Line embryonic stem cell
12 chr6:143453000-143460600 Weak transcription Brain Cingulate Gyrus brain
13 chr6:143453000-143461800 Weak transcription Cortex derived primary cultured neurospheres brain
14 chr6:143453000-143462000 Weak transcription Brain Angular Gyrus brain
15 chr6:143453000-143462000 Weak transcription Colon Smooth Muscle Colon
16 chr6:143453000-143464400 Weak transcription HSMM muscle
17 chr6:143453000-143465400 Weak transcription Rectal Mucosa Donor 31 rectum
18 chr6:143453000-143474200 Weak transcription ES-I3 Cell Line embryonic stem cell
19 chr6:143453000-143481600 Weak transcription Right Ventricle heart
20 chr6:143453000-143497200 Weak transcription Pancreas Pancrea
21 chr6:143453000-143508600 Weak transcription Fetal Lung lung
22 chr6:143453000-143510600 Weak transcription Brain Inferior Temporal Lobe brain
23 chr6:143453200-143460800 Weak transcription Fetal Kidney kidney
24 chr6:143453200-143470800 Weak transcription Primary neutrophils fromperipheralblood blood
25 chr6:143454200-143464000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr6:143456200-143461600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
27 chr6:143456200-143463600 Weak transcription Psoas Muscle Psoas
28 chr6:143456400-143462600 Weak transcription Sigmoid Colon Sigmoid Colon
29 chr6:143457000-143465400 Weak transcription HSMMtube muscle
30 chr6:143457200-143460800 Weak transcription Muscle Satellite Cultured Cells --
31 chr6:143457200-143470800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr6:143457800-143463800 Strong transcription Liver Liver
33 chr6:143458000-143460600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr6:143458200-143462200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
35 chr6:143458200-143486600 Weak transcription Aorta Aorta
36 chr6:143458400-143460800 Weak transcription Breast Myoepithelial Primary Cells Breast
37 chr6:143458400-143463400 Weak transcription Brain Substantia Nigra brain
38 chr6:143458400-143463600 Weak transcription Primary T cells fromperipheralblood blood
39 chr6:143458600-143462600 Weak transcription Primary T helper naive cells fromperipheralblood blood
40 chr6:143458600-143464000 Weak transcription Fetal Muscle Leg muscle
41 chr6:143458600-143468000 Weak transcription Fetal Intestine Small intestine
42 chr6:143458600-143479200 Weak transcription Gastric stomach
43 chr6:143458800-143461000 Weak transcription Skeletal Muscle Female skeletal muscle
44 chr6:143458800-143477800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
45 chr6:143458800-143529200 Weak transcription Primary T cells from cord blood blood
46 chr6:143459200-143460600 Weak transcription Primary T helper cells PMA-I stimulated --
47 chr6:143459200-143461600 Weak transcription HUES6 Cell Line embryonic stem cell
48 chr6:143459200-143461600 Weak transcription K562 blood
49 chr6:143459200-143463600 Weak transcription NH-A brain
50 chr6:143459200-143477800 Weak transcription Left Ventricle heart

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Last update: Aug 31, 2015