The 2.0 version of rSNPBase

Variant report

Variant rs9403449
Chromosome Location chr6:143470844-143470845
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:143441200-143479000 Weak transcription NHLF lung
2 chr6:143443800-143498800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr6:143444600-143516400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr6:143445800-143479200 Weak transcription Lung lung
5 chr6:143448400-143487400 Weak transcription Rectal Mucosa Donor 29 rectum
6 chr6:143452000-143497000 Weak transcription Fetal Stomach stomach
7 chr6:143452200-143477800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr6:143453000-143474200 Weak transcription ES-I3 Cell Line embryonic stem cell
9 chr6:143453000-143481600 Weak transcription Right Ventricle heart
10 chr6:143453000-143497200 Weak transcription Pancreas Pancrea
11 chr6:143453000-143508600 Weak transcription Fetal Lung lung
12 chr6:143453000-143510600 Weak transcription Brain Inferior Temporal Lobe brain
13 chr6:143458200-143486600 Weak transcription Aorta Aorta
14 chr6:143458600-143479200 Weak transcription Gastric stomach
15 chr6:143458800-143477800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr6:143458800-143529200 Weak transcription Primary T cells from cord blood blood
17 chr6:143459200-143477800 Weak transcription Left Ventricle heart
18 chr6:143459200-143477800 Weak transcription NHEK skin
19 chr6:143459200-143479000 Weak transcription Ovary ovary
20 chr6:143459200-143479200 Weak transcription Duodenum Smooth Muscle Duodenum
21 chr6:143459200-143484200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr6:143459400-143479200 Weak transcription Adipose Nuclei Adipose
23 chr6:143459600-143484000 Weak transcription HUES64 Cell Line embryonic stem cell
24 chr6:143459600-143486600 Weak transcription Duodenum Mucosa Duodenum
25 chr6:143459600-143505400 Weak transcription HUES48 Cell Line embryonic stem cell
26 chr6:143459800-143477800 Weak transcription HMEC breast
27 chr6:143461000-143487400 Weak transcription Brain Cingulate Gyrus brain
28 chr6:143462200-143497800 Weak transcription Cortex derived primary cultured neurospheres brain
29 chr6:143462600-143477800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
30 chr6:143462800-143479200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr6:143463000-143508400 Weak transcription Stomach Smooth Muscle stomach
32 chr6:143463800-143476400 Weak transcription Psoas Muscle Psoas
33 chr6:143465800-143483600 Weak transcription H9 Cell Line embryonic stem cell
34 chr6:143466800-143479200 Weak transcription Esophagus oesophagus
35 chr6:143468400-143479000 Weak transcription K562 blood
36 chr6:143468400-143484600 Weak transcription Primary hematopoietic stem cells blood
37 chr6:143469400-143474000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr6:143469400-143475600 Weak transcription HUES6 Cell Line embryonic stem cell
39 chr6:143469800-143472200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr6:143469800-143483600 Weak transcription Fetal Intestine Large intestine
41 chr6:143470000-143473800 Weak transcription Fetal Intestine Small intestine
42 chr6:143470200-143471000 Weak transcription Liver Liver
43 chr6:143470200-143474200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr6:143470200-143485800 Weak transcription HepG2 liver
45 chr6:143470600-143471200 Enhancers Breast Myoepithelial Primary Cells Breast
46 chr6:143470600-143471800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
47 chr6:143470800-143471800 Enhancers NHDF-Ad bronchial
48 chr6:143470800-143471800 Enhancers Osteobl bone
49 chr6:143470800-143472000 Enhancers Primary neutrophils fromperipheralblood blood

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Last update: Aug 31, 2015