The 2.0 version of rSNPBase

Variant report

Variant rs10519208
Chromosome Location chr15:49388249-49388250
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:35 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:49376200-49395200 Weak transcription Muscle Satellite Cultured Cells --
2 chr15:49376400-49397800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr15:49376600-49391600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
4 chr15:49376600-49397600 Weak transcription NHLF lung
5 chr15:49378800-49396800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
6 chr15:49381400-49397400 Weak transcription Primary hematopoietic stem cells short term culture blood
7 chr15:49381400-49402400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr15:49381600-49398000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr15:49381800-49392400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr15:49381800-49395600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
11 chr15:49382400-49393200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
12 chr15:49382600-49402400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
13 chr15:49383400-49392800 Weak transcription NH-A brain
14 chr15:49384000-49392400 Weak transcription HSMM muscle
15 chr15:49385600-49403200 Weak transcription Placenta Placenta
16 chr15:49386400-49388400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr15:49386400-49395200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
18 chr15:49386400-49403400 Weak transcription Brain Hippocampus Middle brain
19 chr15:49386400-49404200 Weak transcription Brain Inferior Temporal Lobe brain
20 chr15:49386800-49391800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr15:49386800-49402600 Weak transcription Gastric stomach
22 chr15:49387000-49397400 Weak transcription Primary T cells from cord blood blood
23 chr15:49387200-49391400 Weak transcription Primary B cells from cord blood blood
24 chr15:49387200-49397600 Weak transcription HSMMtube muscle
25 chr15:49387200-49397800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
26 chr15:49387200-49402400 Weak transcription Spleen Spleen
27 chr15:49387200-49403000 Weak transcription Dnd41 blood
28 chr15:49387400-49391400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr15:49387400-49404200 Weak transcription Placenta Amnion Placenta Amnion
30 chr15:49387800-49389600 Enhancers Fetal Adrenal Gland Adrenal Gland
31 chr15:49388000-49392800 Weak transcription HMEC breast
32 chr15:49388200-49388400 Enhancers HepG2 liver
33 chr15:49388200-49388600 Enhancers Stomach Mucosa stomach
34 chr15:49388200-49388800 Enhancers Duodenum Mucosa Duodenum
35 chr15:49388200-49390800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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Last update: Aug 31, 2015