Variant report
| Variant | rs28790333 |
|---|---|
| Chromosome Location | chr15:49403706-49403707 |
| allele | C/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr15:49386400-49404200 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 2 | chr15:49387400-49404200 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 3 | chr15:49388800-49404400 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 4 | chr15:49388800-49404600 | Weak transcription | Hela-S3 | cervix |
| 5 | chr15:49388800-49418800 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 6 | chr15:49388800-49434800 | Weak transcription | Small Intestine | intestine |
| 7 | chr15:49389600-49404400 | Weak transcription | HepG2 | liver |
| 8 | chr15:49391400-49404200 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 9 | chr15:49393600-49404200 | Weak transcription | Brain Anterior Caudate | brain |
| 10 | chr15:49393600-49404200 | Weak transcription | Brain Substantia Nigra | brain |
| 11 | chr15:49393600-49413200 | Weak transcription | HMEC | breast |
| 12 | chr15:49394000-49404600 | Weak transcription | Brain Cingulate Gyrus | brain |
| 13 | chr15:49395400-49419000 | Weak transcription | Fetal Kidney | kidney |
| 14 | chr15:49395600-49426400 | Weak transcription | Rectal Smooth Muscle | rectum |
| 15 | chr15:49395800-49404200 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 16 | chr15:49395800-49404400 | Strong transcription | Liver | Liver |
| 17 | chr15:49396000-49419600 | Weak transcription | NHEK | skin |
| 18 | chr15:49396400-49418800 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 19 | chr15:49396600-49404200 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 20 | chr15:49396800-49404200 | Strong transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 21 | chr15:49398200-49404600 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 22 | chr15:49398400-49404200 | Weak transcription | K562 | blood |
| 23 | chr15:49398400-49404600 | Weak transcription | HSMMtube | muscle |
| 24 | chr15:49398600-49403800 | Weak transcription | Primary T helper cells fromperipheralblood | blood |
| 25 | chr15:49398600-49404200 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 26 | chr15:49398600-49427600 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 27 | chr15:49399200-49404200 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 28 | chr15:49399200-49414600 | Weak transcription | HUVEC | blood vessel |
| 29 | chr15:49400000-49404200 | Strong transcription | HSMM | muscle |
| 30 | chr15:49400000-49404400 | Weak transcription | Brain Angular Gyrus | brain |
| 31 | chr15:49401200-49404200 | Strong transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 32 | chr15:49401600-49404200 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
| 33 | chr15:49401800-49404200 | Strong transcription | Breast Myoepithelial Primary Cells | Breast |
| 34 | chr15:49401800-49404200 | Strong transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 35 | chr15:49401800-49405000 | Strong transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 36 | chr15:49402200-49403800 | Strong transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 37 | chr15:49402200-49404200 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 38 | chr15:49402200-49404200 | Strong transcription | Primary B cells from cord blood | blood |
| 39 | chr15:49402200-49404200 | Weak transcription | Fetal Lung | lung |
| 40 | chr15:49402400-49403800 | Strong transcription | Primary B cells from peripheral blood | blood |
| 41 | chr15:49402400-49403800 | Strong transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 42 | chr15:49402400-49403800 | Genic enhancers | Right Ventricle | heart |
| 43 | chr15:49402400-49404000 | Strong transcription | GM12878-XiMat | blood |
| 44 | chr15:49402400-49404400 | Strong transcription | Duodenum Mucosa | Duodenum |
| 45 | chr15:49402400-49404400 | Strong transcription | Fetal Muscle Trunk | muscle |
| 46 | chr15:49402400-49404800 | Strong transcription | Sigmoid Colon | Sigmoid Colon |
| 47 | chr15:49402400-49406000 | Strong transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 48 | chr15:49402600-49403800 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 49 | chr15:49402600-49403800 | Strong transcription | Fetal Muscle Leg | muscle |
| 50 | chr15:49402600-49404000 | Strong transcription | NHLF | lung |
