The 2.0 version of rSNPBase

Variant report

Variant rs10798029
Chromosome Location chr1:172454580-172454581
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:15 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:172444200-172456200 Weak transcription Monocytes-CD14+_RO01746 blood
2 chr1:172450200-172456200 Weak transcription Primary T cells from cord blood blood
3 chr1:172450800-172456400 Enhancers Placenta Amnion Placenta Amnion
4 chr1:172452000-172457400 Weak transcription Fetal Intestine Small intestine
5 chr1:172452600-172456600 Weak transcription Fetal Intestine Large intestine
6 chr1:172453200-172456200 Weak transcription Primary neutrophils fromperipheralblood blood
7 chr1:172453200-172456600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
8 chr1:172453800-172454600 Enhancers Placenta Placenta
9 chr1:172453800-172455000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr1:172453800-172456400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
11 chr1:172454200-172454600 Weak transcription NHEK skin
12 chr1:172454200-172454800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr1:172454200-172456200 Weak transcription Primary monocytes fromperipheralblood blood
14 chr1:172454200-172456600 Weak transcription Primary T killer memory cells from peripheral blood blood
15 chr1:172454200-172466000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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Last update: Aug 31, 2015