The 2.0 version of rSNPBase

Variant report

Variant rs9425562
Chromosome Location chr1:172308546-172308547
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:14 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:172275200-172309800 Weak transcription Left Ventricle heart
2 chr1:172304000-172312200 Weak transcription Aorta Aorta
3 chr1:172307400-172308600 Flanking Active TSS GM12878-XiMat blood
4 chr1:172307600-172312600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr1:172307800-172309200 Weak transcription Primary B cells from peripheral blood blood
6 chr1:172307800-172312200 Weak transcription Primary T helper cells fromperipheralblood blood
7 chr1:172307800-172312200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
8 chr1:172308000-172311800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
9 chr1:172308000-172312000 Weak transcription Cortex derived primary cultured neurospheres brain
10 chr1:172308000-172312000 Weak transcription A549 lung
11 chr1:172308000-172312200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
12 chr1:172308000-172312200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
13 chr1:172308000-172312400 Weak transcription Primary T helper naive cells from peripheral blood blood
14 chr1:172308000-172313200 Weak transcription Primary T cells fromperipheralblood blood

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Last update: Aug 31, 2015