The 2.0 version of rSNPBase

Variant report

Variant rs12134821
Chromosome Location chr1:172367540-172367541
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:98 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:172352400-172386400 Weak transcription Psoas Muscle Psoas
2 chr1:172360000-172368200 Weak transcription HepG2 liver
3 chr1:172360200-172368600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr1:172360200-172369200 Weak transcription Spleen Spleen
5 chr1:172360600-172369000 Weak transcription Fetal Muscle Trunk muscle
6 chr1:172360600-172369200 Weak transcription Small Intestine intestine
7 chr1:172361400-172368400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
8 chr1:172362400-172369200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
9 chr1:172362600-172368200 Enhancers Brain Cingulate Gyrus brain
10 chr1:172362800-172368600 Weak transcription Left Ventricle heart
11 chr1:172363600-172367800 Weak transcription Skeletal Muscle Female skeletal muscle
12 chr1:172363600-172368600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
13 chr1:172363800-172367600 Weak transcription Rectal Mucosa Donor 31 rectum
14 chr1:172363800-172368400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr1:172363800-172368400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr1:172363800-172368600 Weak transcription Right Ventricle heart
17 chr1:172363800-172369200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr1:172364000-172367600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
19 chr1:172364000-172368000 Weak transcription Placenta Amnion Placenta Amnion
20 chr1:172364000-172368200 Weak transcription Adipose Nuclei Adipose
21 chr1:172364000-172368400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr1:172364000-172368400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
23 chr1:172364000-172368400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
24 chr1:172364000-172368400 Weak transcription Fetal Muscle Leg muscle
25 chr1:172364000-172368600 Weak transcription iPS-20b Cell Line embryonic stem cell
26 chr1:172364000-172368600 Weak transcription Fetal Thymus thymus
27 chr1:172364000-172369200 Weak transcription Placenta Placenta
28 chr1:172364200-172368400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
29 chr1:172364200-172368400 Weak transcription Duodenum Mucosa Duodenum
30 chr1:172364400-172367800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
31 chr1:172364400-172368400 Weak transcription Primary hematopoietic stem cells blood
32 chr1:172364400-172368400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
33 chr1:172364400-172368600 Weak transcription Fetal Intestine Large intestine
34 chr1:172364600-172367800 Enhancers Primary T helper cells PMA-I stimulated --
35 chr1:172364600-172367800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
36 chr1:172364600-172368400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
37 chr1:172364800-172367600 Weak transcription Primary T killer memory cells from peripheral blood blood
38 chr1:172365000-172368200 Weak transcription ES-I3 Cell Line embryonic stem cell
39 chr1:172365000-172368200 Weak transcription Primary T helper naive cells from peripheral blood blood
40 chr1:172365000-172368400 Weak transcription Primary T cells fromperipheralblood blood
41 chr1:172365000-172368600 Weak transcription Fetal Brain Female brain
42 chr1:172365200-172367600 Weak transcription Primary T killer naive cells fromperipheralblood blood
43 chr1:172365200-172368200 Weak transcription HUES64 Cell Line embryonic stem cell
44 chr1:172365400-172368200 Weak transcription HUES6 Cell Line embryonic stem cell
45 chr1:172365400-172368200 Weak transcription iPS-18 Cell Line embryonic stem cell
46 chr1:172365400-172368400 Weak transcription iPS-15b Cell Line embryonic stem cell
47 chr1:172365600-172367800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr1:172365600-172368600 Weak transcription Fetal Brain Male brain
49 chr1:172365800-172370000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
50 chr1:172366200-172367800 Enhancers Stomach Smooth Muscle stomach

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015