The 2.0 version of rSNPBase

Variant report

Variant rs4471302
Chromosome Location chr1:172367137-172367138
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:96 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:172346600-172367400 Weak transcription Breast Myoepithelial Primary Cells Breast
2 chr1:172352400-172386400 Weak transcription Psoas Muscle Psoas
3 chr1:172356600-172367400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
4 chr1:172360000-172368200 Weak transcription HepG2 liver
5 chr1:172360200-172368600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr1:172360200-172369200 Weak transcription Spleen Spleen
7 chr1:172360600-172369000 Weak transcription Fetal Muscle Trunk muscle
8 chr1:172360600-172369200 Weak transcription Small Intestine intestine
9 chr1:172361400-172368400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
10 chr1:172362400-172369200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr1:172362600-172368200 Enhancers Brain Cingulate Gyrus brain
12 chr1:172362800-172367400 Weak transcription Fetal Adrenal Gland Adrenal Gland
13 chr1:172362800-172368600 Weak transcription Left Ventricle heart
14 chr1:172363600-172367800 Weak transcription Skeletal Muscle Female skeletal muscle
15 chr1:172363600-172368600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
16 chr1:172363800-172367200 Weak transcription Skeletal Muscle Male skeletal muscle
17 chr1:172363800-172367200 Weak transcription HSMMtube muscle
18 chr1:172363800-172367600 Weak transcription Rectal Mucosa Donor 31 rectum
19 chr1:172363800-172368400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr1:172363800-172368400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr1:172363800-172368600 Weak transcription Right Ventricle heart
22 chr1:172363800-172369200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr1:172364000-172367200 Weak transcription Fetal Lung lung
24 chr1:172364000-172367200 Weak transcription Fetal Stomach stomach
25 chr1:172364000-172367400 Weak transcription Sigmoid Colon Sigmoid Colon
26 chr1:172364000-172367400 Enhancers GM12878-XiMat blood
27 chr1:172364000-172367600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr1:172364000-172368000 Weak transcription Placenta Amnion Placenta Amnion
29 chr1:172364000-172368200 Weak transcription Adipose Nuclei Adipose
30 chr1:172364000-172368400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
31 chr1:172364000-172368400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
32 chr1:172364000-172368400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
33 chr1:172364000-172368400 Weak transcription Fetal Muscle Leg muscle
34 chr1:172364000-172368600 Weak transcription iPS-20b Cell Line embryonic stem cell
35 chr1:172364000-172368600 Weak transcription Fetal Thymus thymus
36 chr1:172364000-172369200 Weak transcription Placenta Placenta
37 chr1:172364200-172367200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
38 chr1:172364200-172367200 Weak transcription Fetal Kidney kidney
39 chr1:172364200-172368400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr1:172364200-172368400 Weak transcription Duodenum Mucosa Duodenum
41 chr1:172364400-172367400 Weak transcription Fetal Intestine Small intestine
42 chr1:172364400-172367800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
43 chr1:172364400-172368400 Weak transcription Primary hematopoietic stem cells blood
44 chr1:172364400-172368400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr1:172364400-172368600 Weak transcription Fetal Intestine Large intestine
46 chr1:172364600-172367400 Weak transcription Primary T regulatory cells fromperipheralblood blood
47 chr1:172364600-172367800 Enhancers Primary T helper cells PMA-I stimulated --
48 chr1:172364600-172367800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
49 chr1:172364600-172368400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
50 chr1:172364800-172367600 Weak transcription Primary T killer memory cells from peripheral blood blood

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Last update: Aug 31, 2015