The 2.0 version of rSNPBase

Variant report

Variant rs2301453
Chromosome Location chr1:172358167-172358168
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:172343600-172359800 Weak transcription Brain Angular Gyrus brain
2 chr1:172344800-172359000 Weak transcription Brain Cingulate Gyrus brain
3 chr1:172346600-172367400 Weak transcription Breast Myoepithelial Primary Cells Breast
4 chr1:172349600-172362000 Weak transcription Left Ventricle heart
5 chr1:172349800-172363400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
6 chr1:172350400-172359400 Weak transcription Primary T regulatory cells fromperipheralblood blood
7 chr1:172350400-172362400 Weak transcription Primary T cells fromperipheralblood blood
8 chr1:172350400-172362600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
9 chr1:172351400-172363000 Weak transcription A549 lung
10 chr1:172351800-172359400 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr1:172351800-172363400 Weak transcription H9 Cell Line embryonic stem cell
12 chr1:172352200-172359400 Weak transcription Fetal Muscle Trunk muscle
13 chr1:172352200-172360000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr1:172352200-172363200 Weak transcription Fetal Intestine Large intestine
15 chr1:172352400-172359400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
16 chr1:172352400-172360000 Weak transcription Primary T cells from cord blood blood
17 chr1:172352400-172360000 Weak transcription Small Intestine intestine
18 chr1:172352400-172386400 Weak transcription Psoas Muscle Psoas
19 chr1:172352800-172359400 Weak transcription Brain Anterior Caudate brain
20 chr1:172353000-172359400 Weak transcription Aorta Aorta
21 chr1:172353000-172362600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr1:172353600-172359000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr1:172353600-172359200 Weak transcription Duodenum Smooth Muscle Duodenum
24 chr1:172353600-172359400 Weak transcription Fetal Lung lung
25 chr1:172353600-172359400 Weak transcription Fetal Stomach stomach
26 chr1:172353600-172359400 Weak transcription Rectal Smooth Muscle rectum
27 chr1:172353600-172359600 Weak transcription Colon Smooth Muscle Colon
28 chr1:172353600-172359800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
29 chr1:172353600-172360000 Weak transcription Stomach Smooth Muscle stomach
30 chr1:172353600-172366400 Weak transcription Cortex derived primary cultured neurospheres brain
31 chr1:172353800-172359000 Weak transcription ES-WA7 Cell Line embryonic stem cell
32 chr1:172353800-172359000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
33 chr1:172353800-172359000 Weak transcription Fetal Heart heart
34 chr1:172353800-172359000 Weak transcription HSMMtube muscle
35 chr1:172353800-172359200 Weak transcription ES-I3 Cell Line embryonic stem cell
36 chr1:172353800-172359200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
37 chr1:172353800-172359200 Weak transcription HUES64 Cell Line embryonic stem cell
38 chr1:172353800-172359200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr1:172353800-172359200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
40 chr1:172353800-172359400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr1:172353800-172359400 Weak transcription Muscle Satellite Cultured Cells --
42 chr1:172353800-172359400 Weak transcription Ovary ovary
43 chr1:172354000-172358800 Weak transcription Placenta Amnion Placenta Amnion
44 chr1:172354000-172359400 Weak transcription NHDF-Ad bronchial
45 chr1:172354200-172359400 Weak transcription iPS-15b Cell Line embryonic stem cell
46 chr1:172354600-172358800 Weak transcription Fetal Muscle Leg muscle
47 chr1:172354600-172359800 Weak transcription Skeletal Muscle Male skeletal muscle
48 chr1:172354600-172364000 Weak transcription Fetal Brain Female brain
49 chr1:172355000-172363800 Weak transcription Lung lung
50 chr1:172355600-172359400 Weak transcription Skeletal Muscle Female skeletal muscle

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Last update: Aug 31, 2015