The 2.0 version of rSNPBase

Variant report

Variant rs9425592
Chromosome Location chr1:172359116-172359117
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:69 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:172343600-172359800 Weak transcription Brain Angular Gyrus brain
2 chr1:172346600-172367400 Weak transcription Breast Myoepithelial Primary Cells Breast
3 chr1:172349600-172362000 Weak transcription Left Ventricle heart
4 chr1:172349800-172363400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr1:172350400-172359400 Weak transcription Primary T regulatory cells fromperipheralblood blood
6 chr1:172350400-172362400 Weak transcription Primary T cells fromperipheralblood blood
7 chr1:172350400-172362600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
8 chr1:172351400-172363000 Weak transcription A549 lung
9 chr1:172351800-172359400 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr1:172351800-172363400 Weak transcription H9 Cell Line embryonic stem cell
11 chr1:172352200-172359400 Weak transcription Fetal Muscle Trunk muscle
12 chr1:172352200-172360000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr1:172352200-172363200 Weak transcription Fetal Intestine Large intestine
14 chr1:172352400-172359400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
15 chr1:172352400-172360000 Weak transcription Primary T cells from cord blood blood
16 chr1:172352400-172360000 Weak transcription Small Intestine intestine
17 chr1:172352400-172386400 Weak transcription Psoas Muscle Psoas
18 chr1:172352800-172359400 Weak transcription Brain Anterior Caudate brain
19 chr1:172353000-172359400 Weak transcription Aorta Aorta
20 chr1:172353000-172362600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
21 chr1:172353600-172359200 Weak transcription Duodenum Smooth Muscle Duodenum
22 chr1:172353600-172359400 Weak transcription Fetal Lung lung
23 chr1:172353600-172359400 Weak transcription Fetal Stomach stomach
24 chr1:172353600-172359400 Weak transcription Rectal Smooth Muscle rectum
25 chr1:172353600-172359600 Weak transcription Colon Smooth Muscle Colon
26 chr1:172353600-172359800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
27 chr1:172353600-172360000 Weak transcription Stomach Smooth Muscle stomach
28 chr1:172353600-172366400 Weak transcription Cortex derived primary cultured neurospheres brain
29 chr1:172353800-172359200 Weak transcription ES-I3 Cell Line embryonic stem cell
30 chr1:172353800-172359200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr1:172353800-172359200 Weak transcription HUES64 Cell Line embryonic stem cell
32 chr1:172353800-172359200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr1:172353800-172359200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr1:172353800-172359400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr1:172353800-172359400 Weak transcription Muscle Satellite Cultured Cells --
36 chr1:172353800-172359400 Weak transcription Ovary ovary
37 chr1:172354000-172359400 Weak transcription NHDF-Ad bronchial
38 chr1:172354200-172359400 Weak transcription iPS-15b Cell Line embryonic stem cell
39 chr1:172354600-172359800 Weak transcription Skeletal Muscle Male skeletal muscle
40 chr1:172354600-172364000 Weak transcription Fetal Brain Female brain
41 chr1:172355000-172363800 Weak transcription Lung lung
42 chr1:172355600-172359400 Weak transcription Skeletal Muscle Female skeletal muscle
43 chr1:172355600-172364000 Weak transcription Fetal Brain Male brain
44 chr1:172355800-172359400 Weak transcription Gastric stomach
45 chr1:172356000-172359400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
46 chr1:172356200-172359400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
47 chr1:172356600-172367400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
48 chr1:172358000-172359400 Weak transcription Esophagus oesophagus
49 chr1:172358000-172359400 Weak transcription Fetal Intestine Small intestine
50 chr1:172358000-172359400 Weak transcription Spleen Spleen

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Last update: Aug 31, 2015