Variant report

Variant rs2001127
Chromosome Location chr1:172361516-172361517
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:94 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:172346600-172367400 Weak transcription Breast Myoepithelial Primary Cells Breast
2 chr1:172349600-172362000 Weak transcription Left Ventricle heart
3 chr1:172349800-172363400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr1:172350400-172362400 Weak transcription Primary T cells fromperipheralblood blood
5 chr1:172350400-172362600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
6 chr1:172351400-172363000 Weak transcription A549 lung
7 chr1:172351800-172363400 Weak transcription H9 Cell Line embryonic stem cell
8 chr1:172352200-172363200 Weak transcription Fetal Intestine Large intestine
9 chr1:172352400-172386400 Weak transcription Psoas Muscle Psoas
10 chr1:172353000-172362600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr1:172353600-172366400 Weak transcription Cortex derived primary cultured neurospheres brain
12 chr1:172354600-172364000 Weak transcription Fetal Brain Female brain
13 chr1:172355000-172363800 Weak transcription Lung lung
14 chr1:172355600-172364000 Weak transcription Fetal Brain Male brain
15 chr1:172356600-172367400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
16 chr1:172359800-172363400 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr1:172359800-172363600 Weak transcription Fetal Intestine Small intestine
18 chr1:172360000-172362600 Weak transcription Duodenum Smooth Muscle Duodenum
19 chr1:172360000-172363200 Enhancers Brain Hippocampus Middle brain
20 chr1:172360000-172363400 Enhancers Primary T helper naive cells fromperipheralblood blood
21 chr1:172360000-172368200 Weak transcription HepG2 liver
22 chr1:172360200-172361600 Weak transcription Brain Inferior Temporal Lobe brain
23 chr1:172360200-172362000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
24 chr1:172360200-172362000 Weak transcription Brain Substantia Nigra brain
25 chr1:172360200-172362600 Weak transcription Skeletal Muscle Male skeletal muscle
26 chr1:172360200-172363400 Weak transcription Esophagus oesophagus
27 chr1:172360200-172363400 Weak transcription Fetal Lung lung
28 chr1:172360200-172363400 Weak transcription Placenta Placenta
29 chr1:172360200-172363400 Weak transcription Skeletal Muscle Female skeletal muscle
30 chr1:172360200-172363400 Weak transcription HSMM muscle
31 chr1:172360200-172364200 Enhancers Fetal Kidney kidney
32 chr1:172360200-172368600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
33 chr1:172360200-172369200 Weak transcription Spleen Spleen
34 chr1:172360400-172361600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr1:172360400-172362000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
36 chr1:172360400-172362400 Weak transcription Primary T killer memory cells from peripheral blood blood
37 chr1:172360400-172362400 Weak transcription Fetal Heart heart
38 chr1:172360400-172362600 Weak transcription Brain Cingulate Gyrus brain
39 chr1:172360400-172362600 Weak transcription Stomach Smooth Muscle stomach
40 chr1:172360400-172363200 Weak transcription ES-WA7 Cell Line embryonic stem cell
41 chr1:172360400-172363200 Weak transcription Duodenum Mucosa Duodenum
42 chr1:172360400-172363400 Weak transcription H1 Cell Line embryonic stem cell
43 chr1:172360400-172363400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
44 chr1:172360400-172363400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
45 chr1:172360400-172363400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
46 chr1:172360400-172363400 Weak transcription Right Atrium heart
47 chr1:172360400-172363400 Enhancers NHDF-Ad bronchial
48 chr1:172360600-172361600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
49 chr1:172360600-172361800 Weak transcription Primary T helper cells PMA-I stimulated --
50 chr1:172360600-172362000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood

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