The 2.0 version of rSNPBase

Variant report

Variant rs10829083
Chromosome Location chr10:27124869-27124870
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:27095000-27130600 Weak transcription Rectal Mucosa Donor 31 rectum
2 chr10:27095000-27138600 Weak transcription Fetal Muscle Trunk muscle
3 chr10:27095400-27129800 Weak transcription NHEK skin
4 chr10:27095600-27129000 Weak transcription Right Atrium heart
5 chr10:27095600-27132600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr10:27095600-27148800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr10:27099800-27128800 Weak transcription K562 blood
8 chr10:27101800-27129000 Weak transcription Stomach Mucosa stomach
9 chr10:27104800-27129200 Weak transcription Colonic Mucosa Colon
10 chr10:27107000-27129000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
11 chr10:27107400-27129000 Weak transcription Spleen Spleen
12 chr10:27109400-27132600 Weak transcription HMEC breast
13 chr10:27110000-27130400 Weak transcription HUVEC blood vessel
14 chr10:27111400-27125200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr10:27111800-27129000 Weak transcription Rectal Mucosa Donor 29 rectum
16 chr10:27111800-27129200 Weak transcription Breast Myoepithelial Primary Cells Breast
17 chr10:27111800-27147000 Weak transcription Fetal Intestine Large intestine
18 chr10:27112000-27126000 Weak transcription Skeletal Muscle Female skeletal muscle
19 chr10:27112000-27128800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr10:27112000-27130400 Weak transcription Muscle Satellite Cultured Cells --
21 chr10:27112400-27129000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
22 chr10:27112800-27125000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr10:27112800-27129000 Weak transcription Primary B cells from cord blood blood
24 chr10:27112800-27129000 Weak transcription Brain Anterior Caudate brain
25 chr10:27112800-27129000 Weak transcription Small Intestine intestine
26 chr10:27119400-27129000 Weak transcription Aorta Aorta
27 chr10:27119600-27126000 Weak transcription Primary hematopoietic stem cells blood
28 chr10:27119600-27127200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
29 chr10:27119600-27130400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
30 chr10:27119600-27133600 Weak transcription Thymus Thymus
31 chr10:27119600-27147200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
32 chr10:27119800-27125400 Weak transcription Primary T cells from cord blood blood
33 chr10:27119800-27125600 Weak transcription Primary T killer memory cells from peripheral blood blood
34 chr10:27120000-27125400 Weak transcription Primary neutrophils fromperipheralblood blood
35 chr10:27120000-27126000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
36 chr10:27120000-27128800 Weak transcription Primary T regulatory cells fromperipheralblood blood
37 chr10:27120000-27129200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
38 chr10:27120200-27125800 Weak transcription Monocytes-CD14+_RO01746 blood
39 chr10:27120200-27126000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr10:27120600-27142600 Weak transcription HepG2 liver
41 chr10:27120800-27125600 Weak transcription Primary T helper naive cells fromperipheralblood blood
42 chr10:27120800-27127400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
43 chr10:27121000-27129800 Weak transcription Fetal Brain Female brain
44 chr10:27121200-27130800 Weak transcription Dnd41 blood
45 chr10:27121800-27126200 Weak transcription Primary T cells fromperipheralblood blood
46 chr10:27122200-27125800 Weak transcription Primary hematopoietic stem cells short term culture blood
47 chr10:27122200-27126000 Weak transcription Psoas Muscle Psoas
48 chr10:27122200-27127200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
49 chr10:27122200-27128800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr10:27122200-27128800 Weak transcription Lung lung

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Last update: Aug 31, 2015