The 2.0 version of rSNPBase

Variant report

Variant rs72629731
Chromosome Location chr10:27113561-27113562
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:82 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:27085600-27119000 Weak transcription Fetal Lung lung
2 chr10:27095000-27130600 Weak transcription Rectal Mucosa Donor 31 rectum
3 chr10:27095000-27138600 Weak transcription Fetal Muscle Trunk muscle
4 chr10:27095200-27119000 Weak transcription Duodenum Smooth Muscle Duodenum
5 chr10:27095400-27116200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
6 chr10:27095400-27129800 Weak transcription NHEK skin
7 chr10:27095600-27114600 Weak transcription iPS-15b Cell Line embryonic stem cell
8 chr10:27095600-27115400 Weak transcription Cortex derived primary cultured neurospheres brain
9 chr10:27095600-27129000 Weak transcription Right Atrium heart
10 chr10:27095600-27132600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr10:27095600-27148800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr10:27097200-27120000 Weak transcription HepG2 liver
13 chr10:27099000-27113800 Weak transcription Fetal Brain Female brain
14 chr10:27099800-27128800 Weak transcription K562 blood
15 chr10:27101800-27129000 Weak transcription Stomach Mucosa stomach
16 chr10:27104800-27119200 Weak transcription Esophagus oesophagus
17 chr10:27104800-27129200 Weak transcription Colonic Mucosa Colon
18 chr10:27105000-27122000 Weak transcription Brain Cingulate Gyrus brain
19 chr10:27105800-27114000 Weak transcription HSMM muscle
20 chr10:27106000-27113800 Weak transcription Liver Liver
21 chr10:27106600-27119000 Weak transcription Thymus Thymus
22 chr10:27106600-27122000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr10:27107000-27129000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
24 chr10:27107400-27129000 Weak transcription Spleen Spleen
25 chr10:27107600-27114000 Weak transcription Psoas Muscle Psoas
26 chr10:27108000-27116400 Weak transcription Primary T cells fromperipheralblood blood
27 chr10:27108000-27120600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr10:27108400-27113800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
29 chr10:27109400-27116200 Weak transcription Primary B cells from peripheral blood blood
30 chr10:27109400-27132600 Weak transcription HMEC breast
31 chr10:27110000-27130400 Weak transcription HUVEC blood vessel
32 chr10:27110600-27113800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
33 chr10:27110600-27115400 Weak transcription Fetal Stomach stomach
34 chr10:27110800-27115400 Weak transcription Fetal Intestine Small intestine
35 chr10:27111400-27125200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr10:27111600-27118800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
37 chr10:27111800-27118200 Weak transcription Primary hematopoietic stem cells short term culture blood
38 chr10:27111800-27118600 Weak transcription Primary hematopoietic stem cells blood
39 chr10:27111800-27129000 Weak transcription Rectal Mucosa Donor 29 rectum
40 chr10:27111800-27129200 Weak transcription Breast Myoepithelial Primary Cells Breast
41 chr10:27111800-27147000 Weak transcription Fetal Intestine Large intestine
42 chr10:27112000-27114000 Enhancers Primary T killer naive cells fromperipheralblood blood
43 chr10:27112000-27115800 Enhancers Primary T helper cells fromperipheralblood blood
44 chr10:27112000-27116200 Weak transcription HUES6 Cell Line embryonic stem cell
45 chr10:27112000-27117400 Weak transcription Primary neutrophils fromperipheralblood blood
46 chr10:27112000-27118200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
47 chr10:27112000-27118800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
48 chr10:27112000-27119400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
49 chr10:27112000-27121000 Weak transcription NHDF-Ad bronchial
50 chr10:27112000-27122000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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Last update: Aug 31, 2015