The 2.0 version of rSNPBase

Variant report

Variant rs72629727
Chromosome Location chr10:27084176-27084177
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:27069800-27084600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr10:27070800-27091800 Weak transcription Primary neutrophils fromperipheralblood blood
3 chr10:27071000-27084600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr10:27071200-27089000 Weak transcription Lung lung
5 chr10:27071200-27089600 Weak transcription Spleen Spleen
6 chr10:27071400-27088600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
7 chr10:27073000-27087000 Weak transcription Thymus Thymus
8 chr10:27073000-27088200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
9 chr10:27074800-27091600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
10 chr10:27074800-27091800 Weak transcription Rectal Mucosa Donor 29 rectum
11 chr10:27075000-27087000 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr10:27075000-27087000 Weak transcription Monocytes-CD14+_RO01746 blood
13 chr10:27075000-27089400 Weak transcription Left Ventricle heart
14 chr10:27075000-27091600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
15 chr10:27075000-27104600 Weak transcription Esophagus oesophagus
16 chr10:27075200-27088400 Weak transcription Primary T cells fromperipheralblood blood
17 chr10:27079800-27085000 Weak transcription Primary hematopoietic stem cells blood
18 chr10:27079800-27091800 Weak transcription Fetal Heart heart
19 chr10:27079800-27092200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr10:27080800-27092000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr10:27082200-27088400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
22 chr10:27082200-27105400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr10:27082400-27084600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr10:27082400-27084800 Weak transcription Primary hematopoietic stem cells short term culture blood
25 chr10:27082400-27085400 Weak transcription Fetal Lung lung
26 chr10:27082400-27086400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
27 chr10:27082600-27084400 Weak transcription Primary T regulatory cells fromperipheralblood blood
28 chr10:27082600-27085000 Weak transcription Primary B cells from cord blood blood
29 chr10:27082600-27087000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
30 chr10:27082600-27091600 Weak transcription Skeletal Muscle Male skeletal muscle
31 chr10:27082600-27094000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr10:27082800-27084200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr10:27082800-27084800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
34 chr10:27082800-27086200 Weak transcription Primary T killer naive cells fromperipheralblood blood
35 chr10:27082800-27086400 Weak transcription Brain Cingulate Gyrus brain
36 chr10:27082800-27086600 Weak transcription Primary T helper cells PMA-I stimulated --
37 chr10:27082800-27087600 Weak transcription Brain Inferior Temporal Lobe brain
38 chr10:27082800-27088400 Weak transcription Primary T killer memory cells from peripheral blood blood
39 chr10:27083200-27084200 Weak transcription Primary B cells from peripheral blood blood
40 chr10:27083400-27087800 ZNF genes & repeats GM12878-XiMat blood
41 chr10:27083600-27084800 Weak transcription Primary T helper naive cells fromperipheralblood blood
42 chr10:27083600-27087000 Weak transcription Primary T helper naive cells from peripheral blood blood
43 chr10:27083600-27089800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
44 chr10:27083600-27094800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
45 chr10:27083800-27084200 Enhancers Primary T helper cells fromperipheralblood blood
46 chr10:27083800-27084800 Weak transcription Duodenum Mucosa Duodenum

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Last update: Aug 31, 2015