Variant report

Variant	rs11015447
Chromosome Location	chr10:27291281-27291282
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:27276414..27278401-chr10:27289394..27292379,2	K562	blood:

Extended variants
information (count: 61 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:61)

rs_ID	r²[population]
rs11015368	0.89[EUR][1000 genomes]
rs11015369	0.89[EUR][1000 genomes]
rs11015401	0.89[EUR][1000 genomes]
rs11015449	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11015546	1.00[CHB][hapmap];0.89[JPT][hapmap]
rs12412194	0.89[EUR][1000 genomes]
rs12413932	1.00[EUR][1000 genomes]
rs12414273	0.82[ASN][1000 genomes]
rs12415181	0.87[EUR][1000 genomes]
rs12415376	1.00[EUR][1000 genomes]
rs12415390	0.84[CHB][hapmap];0.94[JPT][hapmap];1.00[EUR][1000 genomes]
rs12416077	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12416080	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12416351	0.87[EUR][1000 genomes]
rs12416563	1.00[EUR][1000 genomes]
rs12570065	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12570454	1.00[EUR][1000 genomes]
rs12570637	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12571068	0.87[EUR][1000 genomes]
rs12571317	1.00[EUR][1000 genomes]
rs12571529	1.00[CHB][hapmap];0.94[JPT][hapmap]
rs12571754	0.89[EUR][1000 genomes]
rs12571809	1.00[EUR][1000 genomes]
rs12571996	0.87[EUR][1000 genomes]
rs12572302	1.00[CHB][hapmap];0.94[JPT][hapmap]
rs12572539	1.00[EUR][1000 genomes]
rs12572707	1.00[CHB][hapmap];0.94[JPT][hapmap]
rs12572862	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12573268	0.87[ASN][1000 genomes]
rs12573419	1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1329993	1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs1854645	1.00[EUR][1000 genomes]
rs2297144	1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs34704508	0.85[ASN][1000 genomes]
rs34873765	1.00[ASN][1000 genomes]
rs3740229	1.00[EUR][1000 genomes]
rs3780924	1.00[CHB][hapmap];0.94[JPT][hapmap]
rs3781096	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3781101	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs3781102	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs3802526	1.00[CHB][hapmap];0.94[JPT][hapmap]
rs3818633	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs3824687	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3824690	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4255447	0.89[EUR][1000 genomes]
rs4747586	1.00[CHB][hapmap];0.94[JPT][hapmap]
rs4749222	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs4749229	1.00[CHB][hapmap];0.94[JPT][hapmap]
rs4749234	1.00[CHB][hapmap]
rs56331929	1.00[EUR][1000 genomes]
rs58885200	1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs59082004	1.00[EUR][1000 genomes]
rs61443189	1.00[EUR][1000 genomes]
rs74128510	1.00[EUR][1000 genomes]
rs74128511	1.00[EUR][1000 genomes]
rs74128512	1.00[EUR][1000 genomes]
rs74128517	1.00[EUR][1000 genomes]
rs74128519	1.00[EUR][1000 genomes]
rs74128521	1.00[EUR][1000 genomes]
rs74128522	1.00[EUR][1000 genomes]
rs74128524	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:86 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:27243000-27294800	Weak transcription	Liver	Liver
2	chr10:27257600-27319000	Weak transcription	Stomach Smooth Muscle	stomach
3	chr10:27269000-27293400	Weak transcription	Skeletal Muscle Female	skeletal muscle
4	chr10:27278600-27309200	Weak transcription	HSMM	muscle
5	chr10:27280600-27295000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
6	chr10:27283000-27291800	Weak transcription	Brain Anterior Caudate	brain
7	chr10:27283200-27388400	Weak transcription	Psoas Muscle	Psoas
8	chr10:27284400-27291400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr10:27284400-27292400	Weak transcription	NHDF-Ad	bronchial
10	chr10:27284400-27310400	Weak transcription	Skeletal Muscle Male	skeletal muscle
11	chr10:27284800-27308800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
12	chr10:27285000-27319200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
13	chr10:27285400-27312000	Weak transcription	Brain Hippocampus Middle	brain
14	chr10:27285400-27319200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
15	chr10:27286200-27302600	Weak transcription	Fetal Heart	heart
16	chr10:27286400-27310000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
17	chr10:27286400-27316600	Weak transcription	Duodenum Mucosa	Duodenum
18	chr10:27286600-27311800	Weak transcription	Primary T cells fromperipheralblood	blood
19	chr10:27286600-27312000	Weak transcription	Fetal Thymus	thymus
20	chr10:27286800-27293800	Weak transcription	HepG2	liver
21	chr10:27287000-27308800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
22	chr10:27287000-27312000	Weak transcription	Cortex derived primary cultured neurospheres	brain
23	chr10:27287000-27350600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
24	chr10:27287200-27297400	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
25	chr10:27287800-27310000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
26	chr10:27287800-27350600	Weak transcription	Aorta	Aorta
27	chr10:27288200-27292000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
28	chr10:27288400-27329400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
29	chr10:27288600-27312000	Weak transcription	Primary T helper cells PMA-I stimulated	--
30	chr10:27288600-27312000	Weak transcription	Primary T helper cells fromperipheralblood	blood
31	chr10:27288800-27295000	Weak transcription	Rectal Mucosa Donor 31	rectum
32	chr10:27288800-27298800	Weak transcription	GM12878-XiMat	blood
33	chr10:27288800-27357000	Weak transcription	Gastric	stomach
34	chr10:27289200-27296600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
35	chr10:27289200-27302400	Weak transcription	Right Ventricle	heart
36	chr10:27289200-27361200	Weak transcription	Brain Cingulate Gyrus	brain
37	chr10:27289400-27291400	Weak transcription	Duodenum Smooth Muscle	Duodenum
38	chr10:27289600-27309800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
39	chr10:27289600-27310000	Weak transcription	HSMMtube	muscle
40	chr10:27289600-27312400	Weak transcription	Brain Substantia Nigra	brain
41	chr10:27289600-27314200	Weak transcription	Spleen	Spleen
42	chr10:27289600-27318800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
43	chr10:27289600-27360800	Weak transcription	Hela-S3	cervix
44	chr10:27289800-27292600	Strong transcription	Fetal Lung	lung
45	chr10:27289800-27295000	Weak transcription	Monocytes-CD14+_RO01746	blood
46	chr10:27289800-27296000	Weak transcription	Pancreas	Pancrea
47	chr10:27289800-27360800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
48	chr10:27290000-27291600	Strong transcription	Fetal Intestine Large	intestine
49	chr10:27290000-27292800	Strong transcription	Primary T cells from cord blood	blood
50	chr10:27290000-27292800	Strong transcription	Fetal Adrenal Gland	Adrenal Gland

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