The 2.0 version of rSNPBase

Variant report

Variant rs2297144
Chromosome Location chr10:27349367-27349368
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:27283200-27388400 Weak transcription Psoas Muscle Psoas
2 chr10:27287000-27350600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
3 chr10:27287800-27350600 Weak transcription Aorta Aorta
4 chr10:27288800-27357000 Weak transcription Gastric stomach
5 chr10:27289200-27361200 Weak transcription Brain Cingulate Gyrus brain
6 chr10:27289600-27360800 Weak transcription Hela-S3 cervix
7 chr10:27289800-27360800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
8 chr10:27290200-27351400 Weak transcription Thymus Thymus
9 chr10:27290200-27361400 Weak transcription Placenta Placenta
10 chr10:27291400-27360600 Weak transcription Lung lung
11 chr10:27291600-27351000 Weak transcription NHLF lung
12 chr10:27291600-27388000 Weak transcription Small Intestine intestine
13 chr10:27292000-27362200 Weak transcription Fetal Brain Male brain
14 chr10:27303600-27361000 Weak transcription Rectal Smooth Muscle rectum
15 chr10:27306000-27360800 Weak transcription Esophagus oesophagus
16 chr10:27312800-27358200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr10:27313200-27363400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
18 chr10:27313200-27388200 Weak transcription Primary T helper naive cells from peripheral blood blood
19 chr10:27313200-27388600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
20 chr10:27313400-27388400 Weak transcription Placenta Amnion Placenta Amnion
21 chr10:27314600-27388800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr10:27317400-27351800 Weak transcription H1 Cell Line embryonic stem cell
23 chr10:27318200-27357400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
24 chr10:27318400-27350600 Weak transcription Primary B cells from peripheral blood blood
25 chr10:27319000-27351200 Weak transcription Primary T helper cells PMA-I stimulated --
26 chr10:27319000-27360400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
27 chr10:27323400-27388600 Weak transcription H9 Cell Line embryonic stem cell
28 chr10:27323600-27361800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
29 chr10:27324200-27352600 Weak transcription Primary T regulatory cells fromperipheralblood blood
30 chr10:27324800-27350600 Weak transcription Rectal Mucosa Donor 29 rectum
31 chr10:27326400-27360600 Weak transcription Spleen Spleen
32 chr10:27326600-27366000 Weak transcription Primary T killer naive cells fromperipheralblood blood
33 chr10:27326800-27349800 Weak transcription HepG2 liver
34 chr10:27326800-27388200 Weak transcription Brain Substantia Nigra brain
35 chr10:27327600-27360400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
36 chr10:27328000-27388200 Weak transcription K562 blood
37 chr10:27329600-27349800 Weak transcription HSMM muscle
38 chr10:27329800-27352000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
39 chr10:27329800-27360600 Weak transcription Skeletal Muscle Male skeletal muscle
40 chr10:27330200-27381400 Weak transcription HSMMtube muscle
41 chr10:27330400-27360400 Weak transcription NHEK skin
42 chr10:27330400-27360600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
43 chr10:27330600-27360800 Weak transcription Primary T killer memory cells from peripheral blood blood
44 chr10:27331200-27351000 Weak transcription Primary hematopoietic stem cells short term culture blood
45 chr10:27331200-27356800 Weak transcription Primary B cells from cord blood blood
46 chr10:27331400-27350600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
47 chr10:27331400-27360600 Weak transcription Sigmoid Colon Sigmoid Colon
48 chr10:27331600-27351200 Weak transcription Ovary ovary
49 chr10:27331600-27355800 Weak transcription Stomach Smooth Muscle stomach
50 chr10:27331800-27350400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived

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Last update: Aug 31, 2015