The 2.0 version of rSNPBase

Variant report

Variant rs11158030
Chromosome Location chr14:55565759-55565760
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:55557800-55568600 Weak transcription Fetal Heart heart
2 chr14:55559200-55569000 Weak transcription Esophagus oesophagus
3 chr14:55560600-55569200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
4 chr14:55561200-55568000 Weak transcription Fetal Muscle Trunk muscle
5 chr14:55561800-55568400 Weak transcription HMEC breast
6 chr14:55561800-55568800 Weak transcription ES-I3 Cell Line embryonic stem cell
7 chr14:55562000-55566400 Weak transcription NHLF lung
8 chr14:55562000-55566600 Weak transcription Osteobl bone
9 chr14:55562000-55568800 Weak transcription HSMM muscle
10 chr14:55563800-55565800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
11 chr14:55563800-55567200 Enhancers Placenta Placenta
12 chr14:55564000-55565800 Enhancers Sigmoid Colon Sigmoid Colon
13 chr14:55564000-55566000 Enhancers Duodenum Mucosa Duodenum
14 chr14:55564000-55566800 Enhancers Primary T cells fromperipheralblood blood
15 chr14:55564000-55569000 Weak transcription HUES6 Cell Line embryonic stem cell
16 chr14:55564000-55569200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
17 chr14:55564000-55570200 Enhancers Stomach Mucosa stomach
18 chr14:55564200-55565800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr14:55564200-55565800 Enhancers Rectal Mucosa Donor 31 rectum
20 chr14:55564200-55566000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
21 chr14:55564200-55566000 Enhancers Primary Natural Killer cells fromperipheralblood blood
22 chr14:55564200-55567000 Weak transcription Lung lung
23 chr14:55564200-55568400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
24 chr14:55564200-55568400 Weak transcription Gastric stomach
25 chr14:55564200-55568800 Weak transcription H1 Cell Line embryonic stem cell
26 chr14:55564200-55569000 Enhancers Fetal Intestine Small intestine
27 chr14:55564400-55565800 Enhancers Primary B cells from peripheral blood blood
28 chr14:55564400-55566200 Enhancers Primary monocytes fromperipheralblood blood
29 chr14:55564400-55566800 Enhancers Monocytes-CD14+_RO01746 blood
30 chr14:55564400-55569800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
31 chr14:55564600-55565800 Enhancers Primary neutrophils fromperipheralblood blood
32 chr14:55564600-55565800 Enhancers Primary T killer naive cells fromperipheralblood blood
33 chr14:55564600-55565800 Enhancers Primary T killer memory cells from peripheral blood blood
34 chr14:55564600-55565800 Flanking Active TSS GM12878-XiMat blood
35 chr14:55564600-55565800 Enhancers NHDF-Ad bronchial
36 chr14:55564800-55568600 Weak transcription Brain Angular Gyrus brain
37 chr14:55565000-55567200 Enhancers Fetal Muscle Leg muscle
38 chr14:55565000-55568600 Weak transcription Colon Smooth Muscle Colon
39 chr14:55565000-55568600 Weak transcription A549 lung
40 chr14:55565000-55568800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr14:55565200-55565800 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
42 chr14:55565200-55565800 Enhancers Psoas Muscle Psoas
43 chr14:55565200-55565800 Enhancers Rectal Mucosa Donor 29 rectum
44 chr14:55565200-55566400 Weak transcription Cortex derived primary cultured neurospheres brain
45 chr14:55565200-55566400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
46 chr14:55565200-55566400 Weak transcription Adipose Nuclei Adipose
47 chr14:55565200-55566400 Weak transcription Duodenum Smooth Muscle Duodenum
48 chr14:55565200-55566400 Weak transcription HepG2 liver
49 chr14:55565200-55566400 Weak transcription NHEK skin
50 chr14:55565200-55567200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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Last update: Aug 31, 2015