Variant report

Variant rs11622128
Chromosome Location chr14:55564526-55564527
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:64 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:55551400-55564800 Weak transcription Right Atrium heart
2 chr14:55557800-55568600 Weak transcription Fetal Heart heart
3 chr14:55559200-55569000 Weak transcription Esophagus oesophagus
4 chr14:55560600-55569200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
5 chr14:55561200-55568000 Weak transcription Fetal Muscle Trunk muscle
6 chr14:55561600-55564600 Weak transcription Cortex derived primary cultured neurospheres brain
7 chr14:55561600-55565000 Weak transcription Fetal Muscle Leg muscle
8 chr14:55561800-55564600 Weak transcription A549 lung
9 chr14:55561800-55564800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr14:55561800-55568400 Weak transcription HMEC breast
11 chr14:55561800-55568800 Weak transcription ES-I3 Cell Line embryonic stem cell
12 chr14:55562000-55564600 Weak transcription NHDF-Ad bronchial
13 chr14:55562000-55564800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
14 chr14:55562000-55564800 Weak transcription NH-A brain
15 chr14:55562000-55566400 Weak transcription NHLF lung
16 chr14:55562000-55566600 Weak transcription Osteobl bone
17 chr14:55562000-55568800 Weak transcription HSMM muscle
18 chr14:55562400-55565000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
19 chr14:55562400-55565000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
20 chr14:55563600-55564600 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
21 chr14:55563600-55565200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
22 chr14:55563600-55565600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr14:55563800-55564600 Flanking Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
24 chr14:55563800-55564600 Enhancers GM12878-XiMat blood
25 chr14:55563800-55565200 Enhancers Adipose Nuclei Adipose
26 chr14:55563800-55565800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr14:55563800-55567200 Enhancers Placenta Placenta
28 chr14:55564000-55564800 Enhancers Rectal Mucosa Donor 29 rectum
29 chr14:55564000-55565200 Enhancers Primary T helper naive cells from peripheral blood blood
30 chr14:55564000-55565600 Enhancers Primary T helper cells fromperipheralblood blood
31 chr14:55564000-55565600 Enhancers Fetal Intestine Large intestine
32 chr14:55564000-55565600 Enhancers Placenta Amnion Placenta Amnion
33 chr14:55564000-55565600 Enhancers Small Intestine intestine
34 chr14:55564000-55565800 Enhancers Sigmoid Colon Sigmoid Colon
35 chr14:55564000-55566000 Enhancers Duodenum Mucosa Duodenum
36 chr14:55564000-55566800 Enhancers Primary T cells fromperipheralblood blood
37 chr14:55564000-55569000 Weak transcription HUES6 Cell Line embryonic stem cell
38 chr14:55564000-55569200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
39 chr14:55564000-55570200 Enhancers Stomach Mucosa stomach
40 chr14:55564200-55564600 Enhancers Primary T helper cells PMA-I stimulated --
41 chr14:55564200-55564600 Weak transcription Colonic Mucosa Colon
42 chr14:55564200-55565000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr14:55564200-55565000 Enhancers Colon Smooth Muscle Colon
44 chr14:55564200-55565200 Enhancers Duodenum Smooth Muscle Duodenum
45 chr14:55564200-55565200 Enhancers NHEK skin
46 chr14:55564200-55565400 Enhancers Hela-S3 cervix
47 chr14:55564200-55565600 Enhancers Primary T regulatory cells fromperipheralblood blood
48 chr14:55564200-55565600 Enhancers Skeletal Muscle Male skeletal muscle
49 chr14:55564200-55565800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr14:55564200-55565800 Enhancers Rectal Mucosa Donor 31 rectum

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