The 2.0 version of rSNPBase

Variant report

Variant rs7144226
Chromosome Location chr14:55567042-55567043
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:55557800-55568600 Weak transcription Fetal Heart heart
2 chr14:55559200-55569000 Weak transcription Esophagus oesophagus
3 chr14:55560600-55569200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
4 chr14:55561200-55568000 Weak transcription Fetal Muscle Trunk muscle
5 chr14:55561800-55568400 Weak transcription HMEC breast
6 chr14:55561800-55568800 Weak transcription ES-I3 Cell Line embryonic stem cell
7 chr14:55562000-55568800 Weak transcription HSMM muscle
8 chr14:55563800-55567200 Enhancers Placenta Placenta
9 chr14:55564000-55569000 Weak transcription HUES6 Cell Line embryonic stem cell
10 chr14:55564000-55569200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
11 chr14:55564000-55570200 Enhancers Stomach Mucosa stomach
12 chr14:55564200-55568400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr14:55564200-55568400 Weak transcription Gastric stomach
14 chr14:55564200-55568800 Weak transcription H1 Cell Line embryonic stem cell
15 chr14:55564200-55569000 Enhancers Fetal Intestine Small intestine
16 chr14:55564400-55569800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
17 chr14:55564800-55568600 Weak transcription Brain Angular Gyrus brain
18 chr14:55565000-55567200 Enhancers Fetal Muscle Leg muscle
19 chr14:55565000-55568600 Weak transcription Colon Smooth Muscle Colon
20 chr14:55565000-55568600 Weak transcription A549 lung
21 chr14:55565000-55568800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr14:55565200-55567200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr14:55565200-55567800 Weak transcription Colonic Mucosa Colon
24 chr14:55565200-55568600 Weak transcription Primary T helper naive cells from peripheral blood blood
25 chr14:55565200-55568600 Weak transcription Brain Substantia Nigra brain
26 chr14:55565200-55569000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
27 chr14:55565200-55569000 Weak transcription Brain Anterior Caudate brain
28 chr14:55565200-55570600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
29 chr14:55565400-55567800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
30 chr14:55565400-55568200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
31 chr14:55565400-55568400 Weak transcription Skeletal Muscle Female skeletal muscle
32 chr14:55565400-55568600 Weak transcription Brain Hippocampus Middle brain
33 chr14:55565400-55568600 Weak transcription NH-A brain
34 chr14:55565400-55568800 Weak transcription Primary T helper naive cells fromperipheralblood blood
35 chr14:55565400-55568800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
36 chr14:55565400-55568800 Weak transcription K562 blood
37 chr14:55565400-55569000 Weak transcription Brain Cingulate Gyrus brain
38 chr14:55565600-55567200 Weak transcription Primary T regulatory cells fromperipheralblood blood
39 chr14:55565600-55567600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
40 chr14:55565600-55567800 Weak transcription Primary T helper cells fromperipheralblood blood
41 chr14:55565600-55567800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr14:55565600-55568600 Weak transcription Primary hematopoietic stem cells short term culture blood
43 chr14:55565600-55568600 Weak transcription Placenta Amnion Placenta Amnion
44 chr14:55565600-55568600 Weak transcription Skeletal Muscle Male skeletal muscle
45 chr14:55565600-55568600 Weak transcription Spleen Spleen
46 chr14:55565800-55567600 Weak transcription Primary T killer memory cells from peripheral blood blood
47 chr14:55565800-55568400 Weak transcription Rectal Mucosa Donor 29 rectum
48 chr14:55565800-55568600 Weak transcription Primary B cells from peripheral blood blood
49 chr14:55565800-55568600 Weak transcription Primary T helper cells PMA-I stimulated --
50 chr14:55565800-55568600 Weak transcription Primary T killer naive cells fromperipheralblood blood

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Last update: Aug 31, 2015