Variant report

Variant	rs11598778
Chromosome Location	chr10:93409085-93409086
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:93407788..93410701-chr10:93411567..93414126,2	K562	blood:

Extended variants
information (count: 43 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:43)

rs_ID	r²[population]
rs10509633	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs11186647	1.00[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs11492697	0.86[ASN][1000 genomes]
rs11591635	0.83[EUR][1000 genomes]
rs11592407	1.00[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs11594086	0.83[EUR][1000 genomes]
rs11595816	0.82[EUR][1000 genomes]
rs11597380	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs11597974	0.83[EUR][1000 genomes]
rs12571806	0.83[EUR][1000 genomes]
rs1418155	0.86[EUR][1000 genomes]
rs1418157	0.84[EUR][1000 genomes]
rs1418159	0.83[EUR][1000 genomes]
rs17106808	0.83[EUR][1000 genomes]
rs17106816	0.83[EUR][1000 genomes]
rs17106843	0.84[EUR][1000 genomes]
rs17106882	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3781228	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs4933218	0.81[ASN][1000 genomes]
rs56122986	0.83[EUR][1000 genomes]
rs57754500	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57867863	0.82[EUR][1000 genomes]
rs59139525	0.84[EUR][1000 genomes]
rs60214919	0.84[EUR][1000 genomes]
rs7072687	1.00[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs7084791	0.83[EUR][1000 genomes]
rs73318257	0.81[EUR][1000 genomes]
rs73318277	0.84[EUR][1000 genomes]
rs73318294	0.84[EUR][1000 genomes]
rs73320144	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs73322039	1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73322041	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73322085	0.86[ASN][1000 genomes]
rs73323903	1.00[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs73323929	1.00[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs74149269	0.86[EUR][1000 genomes]
rs74149270	0.86[EUR][1000 genomes]
rs74149272	0.86[EUR][1000 genomes]
rs748401	0.84[EUR][1000 genomes]
rs7893432	0.84[EUR][1000 genomes]
rs7894061	0.84[EUR][1000 genomes]
rs7902087	0.82[EUR][1000 genomes]
rs7919341	0.89[EUR][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:93403800-93410800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr10:93404600-93411400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow

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