Variant report

Variant	rs73318277
Chromosome Location	chr10:93363445-93363446
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr10:93362637..93365388-chr10:93371389..93374177,2	MCF-7	breast:
2	chr10:93363309..93366261-chr10:93366366..93368768,3	K562	blood:
3	chr10:93347598..93350963-chr10:93361481..93364970,4	K562	blood:
4	chr10:93348521..93350817-chr10:93361481..93363972,2	K562	blood:
5	chr10:93362065..93364214-chr10:93385412..93387121,2	MCF-7	breast:

Extended variants
information (count: 45 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:45)

rs_ID	r²[population]
rs10509628	0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10509630	0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10509633	0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11591635	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11594086	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11595816	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11597380	0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11597974	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11598778	0.84[EUR][1000 genomes]
rs12571806	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1418155	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1418157	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1418159	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1557116	0.88[ASN][1000 genomes]
rs17106808	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17106816	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17106843	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17106882	0.89[EUR][1000 genomes]
rs3781228	0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4590778	0.88[ASN][1000 genomes]
rs55954710	0.92[ASN][1000 genomes]
rs56122986	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57754500	0.84[EUR][1000 genomes]
rs57867863	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs58198809	0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs59139525	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60214919	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60894624	0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7084791	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7089163	0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7089286	0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs73318257	0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73318294	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73320142	0.84[ASN][1000 genomes]
rs73320144	0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs73322039	0.87[EUR][1000 genomes]
rs73322041	0.89[EUR][1000 genomes]
rs74149269	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs74149270	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs74149272	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs748401	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7893432	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7894061	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7902087	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7919341	0.82[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]

No data

Chromatin state (count:54 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:93354600-93364800	Enhancers	Skeletal Muscle Female	skeletal muscle
2	chr10:93357600-93368000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
3	chr10:93357800-93367600	Weak transcription	Brain Hippocampus Middle	brain
4	chr10:93358400-93363800	Weak transcription	Duodenum Smooth Muscle	Duodenum
5	chr10:93358400-93366400	Enhancers	Hela-S3	cervix
6	chr10:93358400-93367600	Weak transcription	Brain Anterior Caudate	brain
7	chr10:93358600-93364000	Weak transcription	Colon Smooth Muscle	Colon
8	chr10:93358800-93363600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
9	chr10:93358800-93363600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
10	chr10:93359400-93363800	Weak transcription	HMEC	breast
11	chr10:93361000-93363600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
12	chr10:93361000-93363800	Weak transcription	Skeletal Muscle Male	skeletal muscle
13	chr10:93361000-93367400	Weak transcription	Psoas Muscle	Psoas
14	chr10:93361200-93366400	Enhancers	Fetal Heart	heart
15	chr10:93361800-93363600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
16	chr10:93361800-93364800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
17	chr10:93361800-93365600	Enhancers	HSMM	muscle
18	chr10:93362000-93365400	Enhancers	Breast Myoepithelial Primary Cells	Breast
19	chr10:93362000-93365400	Enhancers	HSMMtube	muscle
20	chr10:93362200-93363600	Enhancers	A549	lung
21	chr10:93362200-93364000	Enhancers	HepG2	liver
22	chr10:93362200-93364200	Enhancers	Muscle Satellite Cultured Cells	--
23	chr10:93362200-93365400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
24	chr10:93362200-93365400	Enhancers	Fetal Lung	lung
25	chr10:93362400-93363800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
26	chr10:93362400-93364800	Enhancers	Left Ventricle	heart
27	chr10:93362400-93365600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
28	chr10:93362400-93365600	Enhancers	Fetal Stomach	stomach
29	chr10:93362600-93363600	Weak transcription	Brain Cingulate Gyrus	brain
30	chr10:93362600-93363600	Weak transcription	NHDF-Ad	bronchial
31	chr10:93362600-93363800	Weak transcription	Rectal Smooth Muscle	rectum
32	chr10:93362600-93364800	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
33	chr10:93362600-93365200	Enhancers	Placenta Amnion	Placenta Amnion
34	chr10:93362800-93363800	Weak transcription	Stomach Smooth Muscle	stomach
35	chr10:93362800-93364000	Enhancers	Fetal Kidney	kidney
36	chr10:93362800-93364200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
37	chr10:93362800-93367600	Weak transcription	Right Ventricle	heart
38	chr10:93363000-93364000	Enhancers	Aorta	Aorta
39	chr10:93363000-93365400	Enhancers	NHEK	skin
40	chr10:93363200-93364400	Enhancers	Ovary	ovary
41	chr10:93363200-93364400	Enhancers	HUVEC	blood vessel
42	chr10:93363200-93365600	Enhancers	NHLF	lung
43	chr10:93363200-93365800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
44	chr10:93363400-93363800	Enhancers	Esophagus	oesophagus
45	chr10:93363400-93363800	Enhancers	Lung	lung
46	chr10:93363400-93363800	Enhancers	Pancreas	Pancrea
47	chr10:93363400-93363800	Weak transcription	Stomach Mucosa	stomach
48	chr10:93363400-93364000	Enhancers	Right Atrium	heart
49	chr10:93363400-93364600	Enhancers	Gastric	stomach
50	chr10:93363400-93365200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin

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