The 2.0 version of rSNPBase

Variant report

Variant rs1557116
Chromosome Location chr10:93372126-93372127
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:93365600-93373000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr10:93367400-93373600 Enhancers NHDF-Ad bronchial
3 chr10:93368000-93388600 Weak transcription Brain Angular Gyrus brain
4 chr10:93368800-93372800 Enhancers Muscle Satellite Cultured Cells --
5 chr10:93368800-93373000 Weak transcription Rectal Mucosa Donor 29 rectum
6 chr10:93368800-93373200 Weak transcription Duodenum Mucosa Duodenum
7 chr10:93368800-93373600 Weak transcription Duodenum Smooth Muscle Duodenum
8 chr10:93368800-93373800 Weak transcription Small Intestine intestine
9 chr10:93369000-93372800 Weak transcription HUVEC blood vessel
10 chr10:93369000-93373200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
11 chr10:93369000-93387600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
12 chr10:93369200-93373200 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr10:93369200-93373600 Weak transcription Colonic Mucosa Colon
14 chr10:93369400-93372800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr10:93369400-93373000 Enhancers Hela-S3 cervix
16 chr10:93369400-93373600 Weak transcription Adipose Nuclei Adipose
17 chr10:93369400-93378600 Weak transcription Fetal Intestine Small intestine
18 chr10:93369400-93379200 Weak transcription Liver Liver
19 chr10:93369600-93373000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
20 chr10:93369600-93387800 Weak transcription Fetal Brain Male brain
21 chr10:93369800-93373000 Weak transcription Fetal Adrenal Gland Adrenal Gland
22 chr10:93369800-93373400 Weak transcription Breast Myoepithelial Primary Cells Breast
23 chr10:93370400-93374200 Enhancers Fetal Heart heart
24 chr10:93371000-93372600 Weak transcription NH-A brain
25 chr10:93371000-93372800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr10:93371000-93373000 Weak transcription HMEC breast
27 chr10:93371000-93373200 Weak transcription NHEK skin
28 chr10:93371000-93373400 Weak transcription Placenta Amnion Placenta Amnion
29 chr10:93371200-93372600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr10:93371200-93376800 Weak transcription Spleen Spleen
31 chr10:93371400-93372400 Weak transcription HSMM muscle
32 chr10:93371400-93372600 Weak transcription HSMMtube muscle
33 chr10:93371400-93372600 Weak transcription Osteobl bone
34 chr10:93371400-93373000 Weak transcription Left Ventricle heart
35 chr10:93371400-93373000 Weak transcription A549 lung
36 chr10:93371400-93373200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr10:93371400-93373200 Weak transcription Aorta Aorta
38 chr10:93371400-93373800 Weak transcription Psoas Muscle Psoas
39 chr10:93371400-93374400 Weak transcription Fetal Muscle Trunk muscle
40 chr10:93371400-93377000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
41 chr10:93371400-93381400 Weak transcription Cortex derived primary cultured neurospheres brain
42 chr10:93371400-93383600 Weak transcription Ovary ovary
43 chr10:93371400-93383600 Weak transcription Right Ventricle heart
44 chr10:93371400-93386800 Weak transcription Pancreas Pancrea
45 chr10:93371600-93372800 Weak transcription Fetal Stomach stomach
46 chr10:93371600-93373000 Weak transcription Fetal Muscle Leg muscle
47 chr10:93371600-93373000 Weak transcription Stomach Mucosa stomach
48 chr10:93371600-93373400 Weak transcription Right Atrium heart
49 chr10:93371600-93373600 Enhancers Skeletal Muscle Male skeletal muscle
50 chr10:93371600-93377000 Weak transcription Esophagus oesophagus

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Last update: Aug 31, 2015